RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.86□□□□□ -0.35
PTCH1-215ENST00000547672 RLN3Q8WXF3 142 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 EGLN2Q96KS0 407 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 NSMCE2Q96MF7 247 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 KCNC2Q96PR1 638 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 UGT2B28Q9BY64 529 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 KLHL4Q9C0H6 718 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 PCDHAC1Q9H158 963 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 DUSP15Q9H1R2 295 aaPredicted RBP12.86□□□□□ -0.35
PTCH1-215ENST00000547672 DDX31Q9H8H2 851 aaKnown RBP12.86□□□□□ -0.35
PTCH1-215ENST00000547672 CCM2LQ9NUG4 571 aaPredicted RBP12.86□□□□□ -0.35
PTCH1-215ENST00000547672 CUEDC1Q9NWM3 386 aaPredicted RBP12.86□□□□□ -0.35
PTCH1-215ENST00000547672 KLF15Q9UIH9 416 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 PCDHB14Q9Y5E9 798 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 KLK4Q9Y5K2 254 aa12.86□□□□□ -0.35
PTCH1-215ENST00000547672 DHRS12A0PJE2 317 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 LRIT2A6NDA9 550 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 FAM220BPB1ANY3 271 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 CLIC1O00299 241 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 ARPC2O15144 300 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 DFNA5O60443 496 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 GPR37L1O60883 481 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 SORBS2O94875 1100 aaKnown RBP12.85□□□□□ -0.35
PTCH1-215ENST00000547672 ANXA6P08133 673 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 FURINP09958 794 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 NME1P15531 152 aaKnown RBP12.85□□□□□ -0.35
PTCH1-215ENST00000547672 PSMB5P28074 263 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 MSX2P35548 267 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-215ENST00000547672 GRIA3P42263 894 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 MAGEA8P43361 318 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 C21orf59P57076 290 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 TAS2R50P59544 299 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 UBE2IP63279 158 aaKnown RBP12.85□□□□□ -0.35
PTCH1-215ENST00000547672 PDE7AQ13946 482 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 SLC9A5Q14940 896 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 ZIC1Q15915 447 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 TJAP1Q5JTD0 557 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 TPRG1LQ5T0D9 272 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 GLYATQ6IB77 296 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 TRIM40Q6P9F5 258 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 RNF175Q8N4F7 328 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 ANKRD53Q8N9V6 530 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 OR7A2PQ8NGA2 310 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-215ENST00000547672 ZDHHC1Q8WTX9 485 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 DNAJC9Q8WXX5 260 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 DNASE2BQ8WZ79 361 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 GFM2Q969S9 779 aaKnown RBP12.85□□□□□ -0.35
PTCH1-215ENST00000547672 SLC45A3Q96JT2 553 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 SLC6A18Q96N87 628 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 F2RL3Q96RI0 385 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 NLNQ9BYT8 704 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 TWSG1Q9GZX9 223 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 KAT8Q9H7Z6 458 aaKnown RBP12.85□□□□□ -0.35
PTCH1-215ENST00000547672 SERHLQ9NQF3 203 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 ACTR10Q9NZ32 417 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 EHD3Q9NZN3 535 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 VAPAQ9P0L0 249 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 SLAMF8Q9P0V8 285 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 PACSIN3Q9UKS6 424 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 PSME2Q9UL46 239 aa12.85□□□□□ -0.35
PTCH1-215ENST00000547672 TRBV5-3A0A0A0MS03 114 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 A0A1W2PR77 199 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 FEZF1A0PJY2 475 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 OR6C74A6NCV1 312 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 PLPP1O14494 284 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 TXNDC9O14530 226 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 VILLO15195 856 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 KRT75O95678 551 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 SERPIND1P05546 499 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 SLC35G6P0C7Q6 338 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 LAMP1P11279 417 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 IL1RNP18510 177 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 DDCP20711 480 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 BSGP35613 385 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 SSR2P43308 183 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 HSPA13P48723 471 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 POLE2P56282 527 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 KLC1Q07866 573 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 GPR18Q14330 331 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 TAF11Q15544 211 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 ADPRMQ3LIE5 342 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 FAM98BQ52LJ0 330 aaKnown RBP12.84□□□□□ -0.35
PTCH1-215ENST00000547672 TMEM26Q6ZUK4 368 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 VN1R5Q7Z5H4 357 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 PAQR7Q86WK9 346 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 SPPL2CQ8IUH8 684 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 MICU2Q8IYU8 434 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 SAMD14Q8IZD0 417 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-215ENST00000547672 EID3Q8N140 333 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 CAMKVQ8NCB2 501 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 FAM156AQ8NDB6 213 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 OR2L5Q8NG80 312 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 CCL4L1Q8NHW4 92 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 WDR48Q8TAF3 677 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 NT5CQ8TCD5 201 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 CREB3L4Q8TEY5 395 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 RERGQ96A58 199 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-215ENST00000547672 REXO5Q96IC2 774 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms