RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 AIMP2Q13155 320 aaKnown RBP11.23□□□□□ -0.61
YBX3-217ENST00000546164 LAPTM5Q13571 262 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 NAA30Q147X3 362 aaPredicted RBP11.23□□□□□ -0.61
YBX3-217ENST00000546164 SETDB1Q15047 1291 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 RBBP5Q15291 538 aaKnown RBP11.23□□□□□ -0.61
YBX3-217ENST00000546164 TUBB8Q3ZCM7 444 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 FBXO48Q5FWF7 155 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 TECRLQ5HYJ1 363 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 PAGE2BQ5JRK9 111 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 LGSNQ5TDP6 509 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 METTL2BQ6P1Q9 378 aaKnown RBP11.23□□□□□ -0.61
YBX3-217ENST00000546164 ADGRD1Q6QNK2 874 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 TMEM205Q6UW68 189 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 ATG14Q6ZNE5 492 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 TIFABQ6ZNK6 161 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 ABHD13Q7L211 337 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 PTRH1Q86Y79 214 aaKnown RBP11.23□□□□□ -0.61
YBX3-217ENST00000546164 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.23□□□□□ -0.61
YBX3-217ENST00000546164 PRSS58Q8IYP2 241 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 PLD6Q8N2A8 252 aaKnown RBP11.23□□□□□ -0.61
YBX3-217ENST00000546164 GALNT16Q8N428 558 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 OR51Q1Q8NH59 317 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 UHMK1Q8TAS1 419 aaKnown RBP11.23□□□□□ -0.61
YBX3-217ENST00000546164 UTP15Q8TED0 518 aaKnown RBP11.23□□□□□ -0.61
YBX3-217ENST00000546164 EXT2Q93063 718 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 PTCD3Q96EY7 689 aaKnown RBP11.23□□□□□ -0.61
YBX3-217ENST00000546164 SMIM10Q96HG1 83 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 OR1F2PQ96R84 312 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 NUDT9Q9BW91 350 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 YIPF2Q9BWQ6 316 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 VPS11Q9H270 941 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 RHBGQ9H310 441 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 EPB41L4BQ9H329 900 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 C5AR2Q9P296 337 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 NAALAD2Q9Y3Q0 740 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 ZNF451Q9Y4E5 1061 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 SPENQ96T58 3664 aaKnown RBP11.22□□□□□ -0.61
YBX3-217ENST00000546164 TRIM49D1C9J1S8 452 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 SLC28A2O43868 658 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 CCNT2O60583 730 aaKnown RBP11.22□□□□□ -0.61
YBX3-217ENST00000546164 RDH16O75452 317 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 CLEC3AO75596 197 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 TBX6O95947 436 aaPredicted RBP11.22□□□□□ -0.61
YBX3-217ENST00000546164 HPP00738 406 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 SERPIND1P05546 499 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 HEXBP07686 556 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 RBP1P09455 135 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 ZNF888P0CJ79 500 aaPredicted RBP11.22□□□□□ -0.61
YBX3-217ENST00000546164 MYBL2P10244 700 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 CD22P20273 847 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 CASRP41180 1078 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 XCR1P46094 333 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 GLRBP48167 497 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 AGTR2P50052 363 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 EFNA3P52797 238 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 ALDH18A1P54886 795 aaKnown RBP11.22□□□□□ -0.61
YBX3-217ENST00000546164 STXBP1P61764 594 aaKnown RBP11.22□□□□□ -0.61
YBX3-217ENST00000546164 IRF8Q02556 426 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 DOC2AQ14183 400 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 SLC29A2Q14542 456 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 PCBP2Q15366 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
YBX3-217ENST00000546164 TSNAXIP1Q2TAA8 658 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 ADPRMQ3LIE5 342 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 DEFB134Q4QY38 66 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 XKR6Q5GH73 641 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 TEX35Q5T0J7 233 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 VWA5B1Q5TIE3 1220 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 SNX31Q8N9S9 440 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 GAL3ST3Q96A11 431 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 MTBPQ96DY7 904 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 AICDAQ9GZX7 198 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 ZNF552Q9H707 407 aaPredicted RBP11.22□□□□□ -0.61
YBX3-217ENST00000546164 HCN3Q9P1Z3 774 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 OPTCQ9UBM4 332 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 MKL2Q9ULH7 1088 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 TMCO1Q9UM00 188 aa11.22□□□□□ -0.61
YBX3-217ENST00000546164 PRRC2CQ9Y520 2896 aaKnown RBP11.22□□□□□ -0.61
YBX3-217ENST00000546164 TNPO3Q9Y5L0 923 aaKnown RBP11.22□□□□□ -0.61
YBX3-217ENST00000546164 CNTRLQ7Z7A1 2325 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 IGHV1-45A0A0A0MS14 117 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 LRIT2A6NDA9 550 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 A6NL46 340 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 ALOX12BO75342 701 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 JRKO75564 520 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 ALPPP05187 535 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 COX6A1P12074 109 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 GFAPP14136 432 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 EPB42P16452 691 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 HPDP32754 393 aaPredicted RBP11.21□□□□□ -0.61
YBX3-217ENST00000546164 CHIT1Q13231 466 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 PFKFB4Q16877 469 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 IGFL3Q6UXB1 125 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 NDUFAF7Q7L592 441 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 PRICKLE2Q7Z3G6 844 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 VN1R5Q7Z5H4 357 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 LCA5Q86VQ0 697 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 GSPT2Q8IYD1 628 aaKnown RBP11.21□□□□□ -0.61
YBX3-217ENST00000546164 TEX19Q8NA77 164 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 UBE2E3Q969T4 207 aa11.21□□□□□ -0.61
YBX3-217ENST00000546164 C8orf44Q96CB5 159 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms