RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SKP1P63208 163 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 REEP5Q00765 189 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 Q0VFX4 171 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CDC16Q13042 620 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NAA30Q147X3 362 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 OR4D1Q15615 310 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MROH9Q5TGP6 573 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 FAAH2Q6GMR7 532 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 WDR93Q6P2C0 686 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SLCO4C1Q6ZQN7 724 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ABHD13Q7L211 337 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PRSS41Q7RTY9 318 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CCDC91Q7Z6B0 441 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TBC1D1Q86TI0 1168 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ISCA2Q86U28 154 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PDSS2Q86YH6 399 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 KBTBD2Q8IY47 623 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 KRT78Q8N1N4 520 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ZCCHC10Q8TBK6 192 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CPT1CQ8TCG5 803 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 UTP15Q8TED0 518 aaKnown RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MIB2Q96AX9 1013 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MRRFQ96E11 262 aaKnown RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 LMF1Q96S06 567 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MESP1Q9BRJ9 268 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PITHD1Q9GZP4 211 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ZNF700Q9H0M5 742 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SPNS1Q9H2V7 528 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NT5DC2Q9H857 520 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CLK4Q9HAZ1 481 aaKnown RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ZNF160Q9HCG1 818 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 DNAJC11Q9NVH1 559 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 WWOXQ9NZC7 414 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NINJ2Q9NZG7 142 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 GPRC5BQ9NZH0 403 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CD274Q9NZQ7 290 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 HCN3Q9P1Z3 774 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PTBP2Q9UKA9 531 aaKnown RBP9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RNF112Q9ULX5 631 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PLAAQ9Y263 795 aa9.2□□□□□ -0.94
TNFRSF1A-214ENST00000543048 FLNBO75369 2602 aaKnown RBP9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 DOPEY2Q9Y3R5 2298 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 A0A087X1B8 175 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 IGHV1-45A0A0A0MS14 117 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CHST10O43529 356 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 GALR3O60755 368 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RDH16O75452 317 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 JRKO75564 520 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 WFS1O76024 890 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SORBS2O94875 1100 aaKnown RBP9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SERPINA7P05543 415 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SERPINA6P08185 405 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 LTA4HP09960 611 aaKnown RBP9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SLC35E2BP0CK96 405 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 C8orf89P0DMQ9 161 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SMIM10L1P0DMW3 83 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TNFRSF8P28908 595 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 HSPA7P48741 367 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CD97P48960 835 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 AP2B1P63010 937 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PRR20EP86478 221 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PRR20CP86479 221 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PRR20DP86480 221 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PRR20BP86481 221 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PRR20AP86496 221 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 EEF1A2Q05639 463 aaKnown RBP9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 DLG1Q12959 904 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SLMAPQ14BN4 828 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 EFTUD2Q15029 972 aaKnown RBP eCLIP9.19□□□□□ -0.947e-7■■■■■ 36.8
TNFRSF1A-214ENST00000543048 INPP5JQ15735 1006 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 UAP1Q16222 522 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MINDY4Q4G0A6 757 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MFSD4BQ5TF39 518 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SLC6A19Q695T7 634 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 IGFL2Q6UWQ7 119 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ISLR2Q6UXK2 745 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TMIGD1Q6UXZ0 262 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CPEB2Q7Z5Q1 589 aaKnown RBP9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CMC1Q7Z7K0 106 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TMPRSS11BQ86T26 416 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ATCAYQ86WG3 371 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 IFT20Q8IY31 132 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SNX31Q8N9S9 440 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ANKRD53Q8N9V6 530 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PDPRQ8NCN5 879 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PLPP5Q8NEB5 264 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TTLQ8NG68 377 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CREB3L4Q8TEY5 395 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NXNL1Q96CM4 212 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SMIM10Q96HG1 83 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SEC16BQ96JE7 1060 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 FMO2Q99518 471 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TUBB6Q9BUF5 446 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 FUT8Q9BYC5 575 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CD244Q9BZW8 370 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 VN1R1Q9GZP7 353 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 EHD1Q9H4M9 534 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 KLHL31Q9H511 634 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ACSS3Q9H6R3 686 aa9.19□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ALG9Q9H6U8 611 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms