RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 LSM12Q3MHD2 195 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 TOR1AIP1Q5JTV8 583 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 MARC1Q5VT66 337 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 MBLAC2Q68D91 279 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ADNP2Q6IQ32 1131 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 GPRIN1Q7Z2K8 1008 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CLEC14AQ86T13 490 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SCN4BQ8IWT1 228 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 FIBCD1Q8N539 461 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CPSF7Q8N684 471 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 BOLLQ8N9W6 283 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 STOML3Q8TAV4 291 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 TNFAIP8L1Q8WVP5 186 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ITCHQ96J02 903 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CRB3Q9BUF7 120 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF436Q9C0F3 470 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 MAGEH1Q9H213 219 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 DSN1Q9H410 356 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 HEBP1Q9NRV9 189 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 RAD18Q9NS91 495 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PAK1IP1Q9NWT1 392 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 UXTQ9UBK9 157 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 MRPS23Q9Y3D9 190 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PCDHGB5Q9Y5G0 923 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ZCWPW2A0A1B0GU75 182 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 FAM170BA6NMN3 283 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 OR2AT4A6NND4 320 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 LRRTM2O43300 516 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 MOCS2O96007 188 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 HAPLN1P10915 354 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 JUNBP17275 347 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 DCKP27707 260 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 OR1G1P47890 313 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 RGS6P49758 472 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 P2RX3P56373 397 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 RPP30P78346 268 aaKnown RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 ADAM15Q13444 863 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 SETMARQ53H47 684 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 TFAP2DQ7Z6R9 452 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 OR5T3Q8NGG3 340 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 FBXO27Q8NI29 283 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 ADAMTS16Q8TE57 1224 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 SETD7Q8WTS6 366 aaKnown RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 CLP1Q92989 425 aaKnown RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 EXOC2Q96KP1 924 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 GABRQQ9UN88 632 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 DHRS7Q9Y394 339 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 OR6C65A6NJZ3 312 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 CXorf49A8MYA2 514 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 INMT-MINDY4F8WBC2 141 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 HCRTO43612 131 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 UPK1BO75841 260 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 T-ENOLP0DO92 83 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 PRPS2P11908 318 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 NR2C1P13056 603 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 TPH1P17752 444 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 RAB5CP51148 216 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 DNAJB13P59910 316 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 CDK10Q15131 360 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 SLC9B1Q4ZJI4 515 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 ELP2Q6IA86 826 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 VWA5B2Q8N398 1253 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 TEX26Q8N6G2 289 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 C1orf52Q8N6N3 182 aaKnown RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 NDNFQ8TB73 568 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 PIH1D2Q8WWB5 315 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 EDEM1Q92611 657 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 NPLQ9BXD5 320 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 ABI2Q9NYB9 513 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 PDP1Q9P0J1 537 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF69Q9UC07 566 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 LOC100509620A0A075B734 347 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 RHPN2P1A8MT19 583 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 TOR1AO14656 332 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 IFNA17P01571 189 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 C2orf80Q0P641 193 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 PPP1R8Q12972 351 aaKnown RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF234Q14588 700 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 MSANTD1Q6ZTZ1 278 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 PAQR7Q86WK9 346 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 PHTF2Q8N3S3 785 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 OR2T12Q8NG77 320 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 LRRN4Q8WUT4 740 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 SCRN2Q96FV2 425 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 ZFR2Q9UPR6 939 aaKnown RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 BTRCQ9Y297 605 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 PCDHGB2Q9Y5G2 931 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 PTPRDP23468 1912 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 A0A0J9YYE9 177 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 F5H5T6 163 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 MAFKO60675 156 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 FARS2O95363 451 aaKnown RBP5.86□□□□□ -1.47
PTPRD-214ENST00000540109 IGLV3-27P01718 113 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 HLA-DPB1P04440 258 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 CTPS1P17812 591 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 GSTM3P21266 225 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 LHCGRP22888 699 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 ADRA1AP35348 466 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 HK3P52790 923 aa5.86□□□□□ -1.47
PTPRD-214ENST00000540109 NCS1P62166 190 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms