RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 TMEM105Q8N8V8 129 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 GPR156Q8NFN8 814 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 GTF2H4Q92759 462 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 OR52E6Q96RD3 313 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 SLC39A3Q9BRY0 314 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 OR51B5Q9H339 312 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 SLC6A20Q9NP91 592 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 MAN2B2Q9Y2E5 1009 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 PCDHGA2Q9Y5H1 932 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 PCDHA9Q9Y5H5 950 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 EML5Q05BV3 1969 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 ARHGAP10A1A4S6 786 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 ISM1B1AKI9 464 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 HNRNPRO43390 633 aaKnown RBP16.15■□□□□ 0.18
COPS3-212ENST00000539941 OR1F1O43749 312 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 BCAS2O75934 225 aaPredicted RBP16.15■□□□□ 0.18
COPS3-212ENST00000539941 HSD17B1P14061 328 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 BCKDHBP21953 392 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
COPS3-212ENST00000539941 AHRP35869 848 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 KIR3DL1P43629 444 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 DCTN2Q13561 401 aaKnown RBP16.15■□□□□ 0.18
COPS3-212ENST00000539941 FLOT2Q14254 428 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 TRIM25Q14258 630 aaKnown RBP16.15■□□□□ 0.18
COPS3-212ENST00000539941 GPR18Q14330 331 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 ZNF425Q6IV72 752 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 IZUMO2Q6UXV1 221 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 NAGSQ8N159 534 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 OR8J2Q8NGG1 315 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 SLC37A2Q8TED4 501 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 C17orf50Q8WW18 174 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 TMEM125Q96AQ2 219 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 EGLN2Q96KS0 407 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 DPH7Q9BTV6 452 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 MIR1-1HGQ9H1L0 117 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 WBP11Q9Y2W2 641 aaKnown RBP16.15■□□□□ 0.18
COPS3-212ENST00000539941 ENTPD2Q9Y5L3 495 aa16.15■□□□□ 0.18
COPS3-212ENST00000539941 TRBV23OR9-2A0A075B6M9 112 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 A0A0J9YVX5 310 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 GNG14A0A1W2PPG7 69 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 PRORSD1PA6NEY8 169 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 BTN3A3O00478 584 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 NME4O00746 187 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 DNAJA2O60884 412 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 HNRNPCP07910 306 aaKnown RBP eCLIP16.14■□□□□ 0.18
COPS3-212ENST00000539941 CELA2BP08218 269 aaPredicted RBP16.14■□□□□ 0.18
COPS3-212ENST00000539941 ANPEPP15144 967 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 MAOBP27338 520 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 HPCAL1P37235 193 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 RPL3P39023 403 aaKnown RBP16.14■□□□□ 0.18
COPS3-212ENST00000539941 EEFSECP57772 596 aaKnown RBP16.14■□□□□ 0.18
COPS3-212ENST00000539941 NXPH1P58417 271 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 MED21Q13503 144 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 CCNIQ14094 377 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 CAPRIN1Q14444 709 aaKnown RBP16.14■□□□□ 0.18
COPS3-212ENST00000539941 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.14■□□□□ 0.18
COPS3-212ENST00000539941 PAGE2Q7Z2X7 111 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 CAMKMTQ7Z624 323 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 GPR180Q86V85 440 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 GKN2Q86XP6 184 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 KIAA2013Q8IYS2 634 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 OR8J3Q8NGG0 315 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 ZDHHC1Q8WTX9 485 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 ITCHQ96J02 903 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 MPP4Q96JB8 637 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 QRFPRQ96P65 431 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 PRPF18Q99633 342 aaKnown RBP16.14■□□□□ 0.18
COPS3-212ENST00000539941 CGREF1Q99674 301 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 MYNNQ9NPC7 610 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 CMTM6Q9NX76 183 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 ANKMY1Q9P2S6 941 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 SPASTQ9UBP0 616 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 PACSIN3Q9UKS6 424 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 AP3M1Q9Y2T2 418 aa16.14■□□□□ 0.18
COPS3-212ENST00000539941 FEZF1A0PJY2 475 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 ACOT8O14734 319 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 SCAMP2O15127 329 aaKnown RBP16.14■□□□□ 0.17
COPS3-212ENST00000539941 VILLO15195 856 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 SH3BGRLO75368 114 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 ERN1O75460 977 aaKnown RBP16.14■□□□□ 0.17
COPS3-212ENST00000539941 TBX6O95947 436 aaPredicted RBP16.14■□□□□ 0.17
COPS3-212ENST00000539941 COX7A2P14406 83 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 GSTM5P46439 218 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 ARFIP1P53367 373 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 BNIP2Q12982 314 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 UGT8Q16880 541 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 TMEM35AQ53FP2 167 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 KIAA1614Q5VZ46 1190 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 NANOGP8Q6NSW7 305 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 IKBIPQ70UQ0 350 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 RNF148Q8N7C7 305 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 FAM46DQ8NEK8 389 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.14■□□□□ 0.172e-9■■■□□ 17.2
COPS3-212ENST00000539941 DNAJB14Q8TBM8 379 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 JPH3Q8WXH2 748 aaPredicted RBP16.14■□□□□ 0.17
COPS3-212ENST00000539941 PRRX2Q99811 253 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 MUC13Q9H3R2 512 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 NANOGQ9H9S0 305 aa16.14■□□□□ 0.17
COPS3-212ENST00000539941 FAM120CQ9NX05 1096 aaKnown RBP16.14■□□□□ 0.17
COPS3-212ENST00000539941 ADAM29Q9UKF5 820 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms