RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 FOXG1P55316 489 aaPredicted RBP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 KIAA1024LP59773 190 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 POLR2LP62875 67 aaKnown RBP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 CDK3Q00526 305 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 PPARDQ03181 441 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 MSLNQ13421 630 aaPredicted RBP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 ATP1A4Q13733 1029 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 PTPRCAPQ14761 206 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 PDK1Q15118 436 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 TFDP3Q5H9I0 405 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 CFAP58Q5T655 872 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 HENMT1Q5T8I9 393 aaKnown RBP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 RBM44Q6ZP01 1051 aaKnown RBP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 BBS12Q6ZW61 710 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 HEATR4Q86WZ0 1026 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 C17orf82Q86X59 251 aaPredicted RBP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 RCOR2Q8IZ40 523 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 TTC30BQ8N4P2 665 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 GPR26Q8NDV2 337 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 LPCAT1Q8NF37 534 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 OR56A4Q8NGH8 313 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 EXD1Q8NHP7 514 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 ACTL9Q8TC94 416 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 PATE1Q8WXA2 126 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 AKAP1Q92667 903 aaKnown RBP eCLIP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 NUS1Q96E22 293 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 QKIQ96PU8 341 aaKnown RBP eCLIP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 BAG1Q99933 345 aaPredicted RBP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 MLPHQ9BV36 600 aaPredicted RBP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 RIOK2Q9BVS4 552 aaKnown RBP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 OSBPL8Q9BZF1 889 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 SLC25A51Q9H1U9 297 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 ARFGAP3Q9NP61 516 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 SPATS2LQ9NUQ6 558 aaKnown RBP4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 SEPT10Q9P0V9 454 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 KLQ9UEF7 1012 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 AMACRQ9UHK6 382 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 LCMT1Q9UIC8 334 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 SUFUQ9UMX1 484 aa4.93□□□□□ -1.62
GCSHP4-201ENST00000538792 C1orf232A0A0U1RR37 186 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 LOC285095A0A1B0GVY8 99 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 A0A1W2PQM1 296 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 MACROD2A1Z1Q3 448 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 FAM234BA2RU67 622 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 CPED1A4D0V7 1026 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 APOC4-APOC2K7ER74 178 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 PSMD11O00231 422 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 NTN3O00634 580 aaPredicted RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 INPP4BO15327 924 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 DHHO43323 396 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 B4GAT1O43505 415 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 BUD23O43709 281 aaKnown RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 APOC2P02655 101 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 ATP1A1P05023 1023 aaKnown RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 FGF1P05230 155 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 TEAD1P28347 426 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 DUSP1P28562 367 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 ADRA1AP35348 466 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 NR2C2P49116 596 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 SPINT3P49223 89 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 MAZP56270 477 aaKnown RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 CCL7P80098 99 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 CCZ1BP86790 482 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 CCZ1P86791 482 aaPredicted RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 OTUD4Q01804 1114 aaKnown RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 CDK18Q07002 472 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 ILKQ13418 452 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 PTK2BQ14289 1009 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 HLTFQ14527 1009 aaKnown RBP eCLIP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 SIX1Q15475 284 aaPredicted RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 SPA17Q15506 151 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 PYCR3Q53H96 274 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 RAET1GQ6H3X3 334 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 CCDC144NLQ6NUI1 221 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 DOK6Q6PKX4 331 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 EFL1Q7Z2Z2 1120 aaKnown RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 PRUNE1Q86TP1 453 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 TMPRSS12Q86WS5 348 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 KLHDC8BQ8IXV7 354 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 NAGSQ8N159 534 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 NAT14Q8WUY8 206 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 NSMCE1Q8WV22 266 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 TFB1MQ8WVM0 346 aaKnown RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 AP2M1Q96CW1 435 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 HES6Q96HZ4 224 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 TBATAQ96M53 351 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 MAK16Q9BXY0 300 aaKnown RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 WDR26Q9H7D7 661 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 SUDS3Q9H7L9 328 aaPredicted RBP4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 BPIFA1Q9NP55 256 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 SPASTQ9UBP0 616 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 SLC23A2Q9UGH3 650 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 GPR34Q9UPC5 381 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 SLC17A4Q9Y2C5 497 aa4.92□□□□□ -1.62
GCSHP4-201ENST00000538792 A0A1W2PQ67 120 aa4.91□□□□□ -1.62
GCSHP4-201ENST00000538792 A6NCN8 305 aa4.91□□□□□ -1.62
GCSHP4-201ENST00000538792 NEMP2A6NFY4 417 aa4.91□□□□□ -1.62
GCSHP4-201ENST00000538792 CACNB4O00305 520 aaPredicted RBP4.91□□□□□ -1.62
GCSHP4-201ENST00000538792 UGT1A9O60656 530 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms