RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TEX19Q8NA77 164 aa12.44□□□□□ -0.42
PRKDC-206ENST00000536429 RHEBL1Q8TAI7 183 aa12.44□□□□□ -0.42
PRKDC-206ENST00000536429 UBTD2Q8WUN7 234 aa12.44□□□□□ -0.42
PRKDC-206ENST00000536429 NACC2Q96BF6 587 aa12.44□□□□□ -0.42
PRKDC-206ENST00000536429 PEX11GQ96HA9 241 aa12.44□□□□□ -0.42
PRKDC-206ENST00000536429 SMIM10Q96HG1 83 aa12.44□□□□□ -0.42
PRKDC-206ENST00000536429 SMAD5Q99717 465 aaKnown RBP12.44□□□□□ -0.42
PRKDC-206ENST00000536429 MFRPQ9BY79 579 aa12.44□□□□□ -0.42
PRKDC-206ENST00000536429 ZNF160Q9HCG1 818 aa12.44□□□□□ -0.42
PRKDC-206ENST00000536429 ATP13A2Q9NQ11 1180 aa12.44□□□□□ -0.42
PRKDC-206ENST00000536429 GPRC5BQ9NZH0 403 aa12.44□□□□□ -0.42
PRKDC-206ENST00000536429 COPG2Q9UBF2 871 aa12.44□□□□□ -0.42
PRKDC-206ENST00000536429 ZNF490Q9ULM2 529 aaPredicted RBP12.44□□□□□ -0.42
PRKDC-206ENST00000536429 IGHV3-20A0A0C4DH32 117 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 A0A0G2JN53 185 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 EXOC1LA0A1B0GW35 172 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 J3QKU1 62 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 H2AFYO75367 372 aaKnown RBP12.43□□□□□ -0.42
PRKDC-206ENST00000536429 CDC123O75794 336 aaPredicted RBP12.43□□□□□ -0.42
PRKDC-206ENST00000536429 SERPINA6P08185 405 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 ITGA3P26006 1051 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 HNRNPH1P31943 449 aaKnown RBP12.43□□□□□ -0.42
PRKDC-206ENST00000536429 CASRP41180 1078 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 SERPINB9P50453 376 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 SOX8P57073 446 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 TLE1Q04724 770 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 AIMP2Q13155 320 aaKnown RBP12.43□□□□□ -0.42
PRKDC-206ENST00000536429 HERC3Q15034 1050 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 ACAP2Q15057 778 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 PFKFB4Q16877 469 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 MINDY4Q4G0A6 757 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 TECRLQ5HYJ1 363 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 TOR1AIP1Q5JTV8 583 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 VWA5B1Q5TIE3 1220 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 TMEM205Q6UW68 189 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 TRMT10CQ7L0Y3 403 aaKnown RBP12.43□□□□□ -0.42
PRKDC-206ENST00000536429 TRPV3Q8NET8 790 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 WDR34Q96EX3 536 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 LANCL2Q9NS86 450 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 LUZP4Q9P127 313 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 ZNF180Q9UJW8 692 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 ANAPC2Q9UJX6 822 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 ZNF451Q9Y4E5 1061 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 IKBKGQ9Y6K9 419 aa12.43□□□□□ -0.42
PRKDC-206ENST00000536429 LOC102723996A0A087X1L8 192 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 IGHV1-45A0A0A0MS14 117 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 A0A1W2PQ72 361 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 K7EPI3 171 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 CLGNO14967 610 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 CHST10O43529 356 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 KLK8O60259 260 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 SIX3O95343 332 aaPredicted RBP12.42□□□□□ -0.42
PRKDC-206ENST00000536429 HPP00738 406 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 CXCR2P25025 360 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 MLLT10P55197 1068 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 IRF8Q02556 426 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 CHIT1Q13231 466 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 SLC29A2Q14542 456 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 SETDB1Q15047 1291 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 PCOLCEQ15113 449 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 MFSD4BQ5TF39 518 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 ABHD13Q7L211 337 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 NDUFAF7Q7L592 441 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 CCDC91Q7Z6B0 441 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 KRT78Q8N1N4 520 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 RNF175Q8N4F7 328 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 TEX9Q8N6V9 391 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 CCT6BQ92526 530 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 TSLPQ969D9 159 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 PTCD3Q96EY7 689 aaKnown RBP12.42□□□□□ -0.42
PRKDC-206ENST00000536429 THOC3Q96J01 351 aaKnown RBP12.42□□□□□ -0.42
PRKDC-206ENST00000536429 CAPS2Q9BXY5 557 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 EHD1Q9H4M9 534 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 CPSF2Q9P2I0 782 aaKnown RBP12.42□□□□□ -0.42
PRKDC-206ENST00000536429 XPR1Q9UBH6 696 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 OPTCQ9UBM4 332 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 CSAG2Q9Y5P2 127 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 SCN3AQ9NY46 2000 aa12.42□□□□□ -0.42
PRKDC-206ENST00000536429 NSG1A0A0A6YYJ2 146 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 LRIT2A6NDA9 550 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 SYCE1LA8MT33 242 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 FAM227AF5H4B4 570 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 KRT38O76015 456 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 WFS1O76024 890 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 ZIC2O95409 532 aaPredicted RBP12.41□□□□□ -0.42
PRKDC-206ENST00000536429 SNRPAP09012 282 aaKnown RBP12.41□□□□□ -0.42
PRKDC-206ENST00000536429 SBK3P0C264 359 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 C8orf89P0DMQ9 161 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 GFAPP14136 432 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 BTN3A2P78410 334 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 RHAGQ02094 409 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 E2F2Q14209 437 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 NAA30Q147X3 362 aaPredicted RBP12.41□□□□□ -0.42
PRKDC-206ENST00000536429 TBCCQ15814 346 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 IGFBP7Q16270 282 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 FAM219BQ5XKK7 198 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 KLC3Q6P597 504 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 ADGRD1Q6QNK2 874 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 TAOK1Q7L7X3 1001 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 Q8NA96 180 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms