RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CDSNQ15517 529 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 DEFB134Q4QY38 66 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 TMEM211Q6ICI0 200 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 LCTLQ6UWM7 567 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 TMEM139Q8IV31 216 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 MFSD9Q8NBP5 474 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 OR5T3Q8NGG3 340 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 ELP5Q8TE02 316 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 TM4SF19Q96DZ7 209 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 PTCHD1Q96NR3 888 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 DEFB126Q9BYW3 111 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 PARVBQ9HBI1 364 aa12.17□□□□□ -0.46
TNFRSF1A-207ENST00000535958 CELSR1Q9NYQ6 3014 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 SAGE2PA6NJ88 616 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 GOLGA8MH3BSY2 632 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 ZNHIT1O43257 154 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 CEP104O60308 925 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 KRT38O76015 456 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 MLNP12872 115 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 CD1EP15812 388 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 KRTAP10-9P60411 292 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 OLR1P78380 273 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 PWP1Q13610 501 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 SPNS3Q6ZMD2 512 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 MBOAT1Q6ZNC8 495 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 CEP128Q6ZU80 1094 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 TMEM200AQ86VY9 491 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 KIF2BQ8N4N8 673 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 TMEM156Q8N614 296 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 SPC24Q8NBT2 197 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 ZNF740Q8NDX6 193 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 FAM57AQ8TBR7 257 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 DMRTA2Q96SC8 542 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 AARSD1Q9BTE6 412 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 TRIM54Q9BYV2 358 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 ENKD1Q9H0I2 346 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 LANCL2Q9NS86 450 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 TAS2R13Q9NYV9 303 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 PDE10AQ9Y233 779 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 NEU2Q9Y3R4 380 aa12.16□□□□□ -0.46
TNFRSF1A-207ENST00000535958 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 A0A1B0GTH9 108 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 FAM90A27PA6NNH2 459 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 SLC16A5O15375 505 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 CHST10O43529 356 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 LCMT2O60294 686 aaKnown RBP12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 GALR3O60755 368 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 KRT14P02533 472 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 ZNF888P0CJ79 500 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 PTGER1P34995 402 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 HLCSP50747 726 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 MLF1P58340 268 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 ZNF468Q5VIY5 522 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 ZNF549Q6P9A3 640 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 PAOXQ6QHF9 649 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 CYHR1Q6ZMK1 362 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 QSOX2Q6ZRP7 698 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 SHISA5Q8N114 240 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 CYP4Z2PQ8N1L4 340 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 EEF1AKMT1Q8WVE0 214 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 LINGO1Q96FE5 620 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 NDNQ99608 321 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 CCDC77Q9BR77 488 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 RHBGQ9H310 441 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 TP63Q9H3D4 680 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 IARS2Q9NSE4 1012 aaKnown RBP12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 ARL15Q9NXU5 204 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 ADAMTS6Q9UKP5 1117 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 FBXO5Q9UKT4 447 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 FBXW2Q9UKT8 454 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 SH2B3Q9UQQ2 575 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 MED16Q9Y2X0 877 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 ASB1Q9Y576 335 aa12.15□□□□□ -0.46
TNFRSF1A-207ENST00000535958 TRBV11-1A0A0K0K1C0 115 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TRBC2A0A5B9 178 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ACOT7O00154 380 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 HS6ST1O60243 411 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 HAUS5O94927 633 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 RNH1P13489 461 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TFEBP19484 476 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CHRNB4P30926 498 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TRHRP34981 398 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 RFC3P40938 356 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CLCN2P51788 898 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 DHX9Q08211 1270 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PDAP1Q13442 181 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CSHL1Q14406 222 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 HSP90AA5PQ58FG0 334 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ANKRD22Q5VYY1 191 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 DUPD1Q68J44 220 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ARHGAP11AQ6P4F7 1023 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CAND1Q86VP6 1230 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 GPATCH11Q8N954 259 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ATL1Q8WXF7 558 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 RND1Q92730 232 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SERPINB12Q96P63 405 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ZNF559Q9BR84 538 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SGPP1Q9BX95 441 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SLC24A3Q9HC58 644 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms