RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 OR1C1Q15619 314 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.81■□□□□ 0.12
CPSF1-207ENST00000531727 ZC3HC1Q86WB0 502 aaKnown RBP15.81■□□□□ 0.12
CPSF1-207ENST00000531727 CREG2Q8IUH2 290 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 ANKMY2Q8IV38 441 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 NKAPQ8N5F7 415 aaKnown RBP15.81■□□□□ 0.12
CPSF1-207ENST00000531727 SLC5A8Q8N695 610 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 TRPV3Q8NET8 790 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 UTP15Q8TED0 518 aaKnown RBP15.81■□□□□ 0.12
CPSF1-207ENST00000531727 AIF1LQ9BQI0 150 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 TRIM51Q9BSJ1 452 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 SLC6A16Q9GZN6 736 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 ANKRD10Q9NXR5 420 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 COPG2Q9UBF2 871 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 ENTPD4Q9Y227 616 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 ITPR2Q14571 2701 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 TRGV8A0A0C4DH27 118 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 FAM95CA0A1B0GW59 222 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 NPEPPSL1A6NEC2 478 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 CDC7O00311 574 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 TTI1O43156 1089 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 MAN1A2O60476 641 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 SAT1P21673 171 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 CA7P43166 264 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 TAS2R50P59544 299 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 CDKL1Q00532 357 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 RBPJQ06330 500 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 ZNF460Q14592 562 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 NXPE4Q6UWF7 544 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 QSOX2Q6ZRP7 698 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 TMPRSS11BQ86T26 416 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 LGI4Q8N135 537 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 ANKRD53Q8N9V6 530 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 ELP5Q8TE02 316 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 SCMH1Q96GD3 660 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 GRPEL1Q9HAV7 217 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 CLK4Q9HAZ1 481 aaKnown RBP15.8■□□□□ 0.12
CPSF1-207ENST00000531727 KLHL1Q9NR64 748 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 SUCOQ9UBS9 1254 aaKnown RBP15.8■□□□□ 0.12
CPSF1-207ENST00000531727 SLC22A14Q9Y267 594 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 KCNE2Q9Y6J6 123 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 CACNA1DQ01668 2161 aa15.8■□□□□ 0.12
CPSF1-207ENST00000531727 DIDO1Q9BTC0 2240 aaKnown RBP15.79■□□□□ 0.12
CPSF1-207ENST00000531727 CTAGE15A4D2H0 777 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 URADA6NGE7 173 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 GABRR3A8MPY1 467 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 PRSS44E7EML9 344 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 CCL21O00585 134 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 TP73O15350 636 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 HNRNPRO43390 633 aaKnown RBP15.79■□□□□ 0.12
CPSF1-207ENST00000531727 B4GALT2O60909 372 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 SMIM10L1P0DMW3 83 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 CD46P15529 392 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 HNF4AP41235 474 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 HNMTP50135 292 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 ST13P50502 369 aaKnown RBP15.79■□□□□ 0.12
CPSF1-207ENST00000531727 TAS2R39P59534 338 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 RAB8AP61006 207 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 HYAL2Q12891 473 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 PDIA2Q13087 525 aaKnown RBP15.79■□□□□ 0.12
CPSF1-207ENST00000531727 FASTKD3Q14CZ7 662 aaKnown RBP15.79■□□□□ 0.12
CPSF1-207ENST00000531727 SPINK14Q6IE38 97 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 MTFR2Q6P444 385 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 CTAGE6Q86UF2 777 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 TMEM178AQ8NBL3 297 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 FBXO36Q8NEA4 188 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 ITLN2Q8WWU7 325 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-207ENST00000531727 MARVELD3Q96A59 401 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 CCDC120Q96HB5 630 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 SMIM10Q96HG1 83 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 PTCHD1Q96NR3 888 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 HES7Q9BYE0 225 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 TRIM31Q9BZY9 425 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 MOCS1Q9NZB8 636 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 OARD1Q9Y530 152 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 CENPEQ02224 2701 aa15.79■□□□□ 0.12
CPSF1-207ENST00000531727 ASPDHA6ND91 283 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 USP27XA6NNY8 438 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 E7ESA3 106 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 CCDC188H7C350 402 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 CDK2AP1O14519 115 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 NDC80O14777 642 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 PRMT3O60678 531 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 WISP2O76076 250 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 RNH1P13489 461 aaKnown RBP15.78■□□□□ 0.12
CPSF1-207ENST00000531727 EEF1DP29692 281 aaKnown RBP15.78■□□□□ 0.12
CPSF1-207ENST00000531727 BTG2P78543 158 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 OC90Q02509 493 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-207ENST00000531727 ART3Q13508 389 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 RBBP5Q15291 538 aaKnown RBP15.78■□□□□ 0.12
CPSF1-207ENST00000531727 SP5Q6BEB4 398 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-207ENST00000531727 ADAMTSL2Q86TH1 951 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 RPS19BP1Q86WX3 136 aaKnown RBP15.78■□□□□ 0.12
CPSF1-207ENST00000531727 CYP4X1Q8N118 509 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 KIF2BQ8N4N8 673 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 HORMAD2Q8N7B1 307 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 CREB3L4Q8TEY5 395 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 ANKRD49Q8WVL7 239 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 EGFL8Q99944 293 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 KLHL31Q9H511 634 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms