RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	STAG3L4	Q8TBR4	150 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	CPT1C	Q8TCG5	803 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	UTP15	Q8TED0	518 aa	Known RBP	11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	KCTD4	Q8WVF5	259 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	TM9SF4	Q92544	642 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	NXNL1	Q96CM4	212 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	OR1F2P	Q96R84	312 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	EHD1	Q9H4M9	534 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	KLHL31	Q9H511	634 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	NMRAL1	Q9HBL8	299 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	SLAMF7	Q9NQ25	335 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	SNX15	Q9NRS6	342 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	DNAJC11	Q9NVH1	559 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	GPRC5B	Q9NZH0	403 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	NUDT4	Q9NZJ9	180 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	COPG2	Q9UBF2	871 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	B3GNT3	Q9Y2A9	372 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362	HECTD1	Q9ULT8	2610 aa		11.1	□□□□□ -0.63
PSMC3-205	ENST00000528362		A0A087X1B8	175 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	IGHV3-20	A0A0C4DH32	117 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	UBXN8	O00124	270 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	CDC123	O75794	336 aa	Predicted RBP	11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	S100B	P04271	92 aa	Predicted RBP	11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	SERPINA7	P05543	415 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	C2	P06681	752 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	SERPINA6	P08185	405 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	SMIM10L1	P0DMW3	83 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	CD22	P20273	847 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	HNRNPH1	P31943	449 aa	Known RBP	11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	PHB	P35232	272 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	AGTR2	P50052	363 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	RAB8A	P61006	207 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	RHAG	Q02094	409 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	TOR1AIP1	Q5JTV8	583 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	MFSD4B	Q5TF39	518 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	TMIGD1	Q6UXZ0	262 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362		Q6ZS92	163 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	LRRC70	Q7Z2Q7	622 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	VN1R5	Q7Z5H4	357 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	CUZD1	Q86UP6	607 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	ZADH2	Q8N4Q0	377 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	SNX31	Q8N9S9	440 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	BRIX1	Q8TDN6	353 aa	Known RBP	11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	PPP4R1	Q8TF05	950 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	UBTD2	Q8WUN7	234 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	SLC44A1	Q8WWI5	657 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	METTL21A	Q8WXB1	218 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	PSMF1	Q92530	271 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	WDR34	Q96EX3	536 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	PEX11G	Q96HA9	241 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	SMIM10	Q96HG1	83 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	IMMP1L	Q96LU5	166 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	WDR77	Q9BQA1	342 aa	Predicted RBP	11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	CAPS2	Q9BXY5	557 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	CD244	Q9BZW8	370 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	TSPYL1	Q9H0U9	437 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362	ACOT9	Q9Y305	439 aa		11.09	□□□□□ -0.63
PSMC3-205	ENST00000528362		A0A096LPK6	155 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	URAD	A6NGE7	173 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	CYSRT1	A8MQ03	144 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	SUPT3H	B4E1H0	165 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	CHST10	O43529	356 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	CCNT2	O60583	730 aa	Known RBP	11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	H2AFY	O75367	372 aa	Known RBP	11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	SUPT3H	O75486	399 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	SEC24D	O94855	1032 aa	Predicted RBP	11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	TBX6	O95947	436 aa	Predicted RBP	11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	FH	P07954	510 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	ITGAM	P11215	1152 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	MTHFD2	P13995	350 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	IL10	P22301	178 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	SOX11	P35716	441 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	UQCRFS1	P47985	274 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	SERPINB8	P50452	374 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	SKP1	P63208	163 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	MFAP5	Q13361	173 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	DOC2A	Q14183	400 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	ABRAXAS2	Q15018	415 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	XKR6	Q5GH73	641 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	ADNP2	Q6IQ32	1131 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	NIPAL1	Q6NVV3	410 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	ISLR2	Q6UXK2	745 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	LINC00696	Q6ZRV3	163 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	RIPOR1	Q6ZS17	1223 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	CCDC91	Q7Z6B0	441 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	ANKRD37	Q7Z713	158 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	KRT78	Q8N1N4	520 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	SIRT6	Q8N6T7	355 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	CEP112	Q8N8E3	955 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	TTL	Q8NG68	377 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	TSLP	Q969D9	159 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	GAL3ST3	Q96A11	431 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	ISL2	Q96A47	359 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	TBC1D20	Q96BZ9	403 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	TRIM44	Q96DX7	344 aa	Predicted RBP	11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	PTCD3	Q96EY7	689 aa	Known RBP	11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	GPR78	Q96P69	363 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	PAFAH2	Q99487	392 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	TUBB6	Q9BUF5	446 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms