RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 MCATQ8IVS2 390 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 OR4K1Q8NGD4 311 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 ATP6V1E2Q96A05 226 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 ZNF501Q96CX3 271 aaPredicted RBP11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 PTCD3Q96EY7 689 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 CAPS2Q9BXY5 557 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 SHCBP1LQ9BZQ2 653 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 CHRNA10Q9GZZ6 450 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 SPRTNQ9H040 489 aaPredicted RBP11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 PLCL2Q9UPR0 1127 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 RNF11Q9Y3C5 154 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 NUP210LQ5VU65 1888 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 KCNE1BA0A087WTH5 132 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 H3BMH7 237 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 FFAR3O14843 346 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 POLR1CO15160 346 aaPredicted RBP11□□□□□ -0.65
CCDC90B-210ENST00000528149 GPR42O15529 346 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 LCMT2O60294 686 aaKnown RBP11□□□□□ -0.65
CCDC90B-210ENST00000528149 OR4F21O95013 312 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 OTCP00480 354 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 EIF2S1P05198 315 aaKnown RBP11□□□□□ -0.65
CCDC90B-210ENST00000528149 CHRNGP07510 517 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 PCNAP12004 261 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 BGNP21810 368 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 GNLYP22749 145 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 GRK3P35626 688 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 SCTRP47872 440 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 SLC18A1P54219 525 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 ITGA1P56199 1179 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 RPS18P62269 152 aaKnown RBP11□□□□□ -0.65
CCDC90B-210ENST00000528149 PPP2R2AP63151 447 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 ASPHQ12797 758 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 LCP2Q13094 533 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 GPS2Q13227 327 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 RBBP5Q15291 538 aaKnown RBP11□□□□□ -0.65
CCDC90B-210ENST00000528149 TBCCQ15814 346 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 ZC3H12BQ5HYM0 836 aaKnown RBP11□□□□□ -0.65
CCDC90B-210ENST00000528149 DCAF12Q5T6F0 453 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 GRHL2Q6ISB3 625 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 FBXO42Q6P3S6 717 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 GPRIN3Q6ZVF9 776 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 VN1R4Q7Z5H5 301 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 ANKRD53Q8N9V6 530 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 MFSD9Q8NBP5 474 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 OR4F6Q8NGB9 312 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 PPP1R14CQ8TAE6 165 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 SREK1Q8WXA9 508 aaKnown RBP11□□□□□ -0.65
CCDC90B-210ENST00000528149 WDR34Q96EX3 536 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 OR2A5Q96R48 311 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 ZNF382Q96SR6 550 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 MACROD1Q9BQ69 325 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 EFCAB11Q9BUY7 163 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 DDA1Q9BW61 102 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 ULBP3Q9BZM4 244 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 EHD1Q9H4M9 534 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 ZNF225Q9UK10 706 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 RARRES3Q9UL19 164 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 PCDHGA3Q9Y5H0 932 aa11□□□□□ -0.65
CCDC90B-210ENST00000528149 UBFD1O14562 309 aaKnown RBP10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 BIRC5O15392 142 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 ZSCAN9O15535 394 aaPredicted RBP10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 NDUFS4O43181 175 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 H2AFYO75367 372 aaKnown RBP10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 LYPLA1O75608 230 aaPredicted RBP10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 OR2B3O76000 313 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 WFS1O76024 890 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 CLDN9O95484 217 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 MLYCDO95822 493 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 SERPIND1P05546 499 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 FURINP09958 794 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 MSL3P1P0C860 447 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 FGF5P12034 268 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 NEFHP12036 1026 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 CHN1P15882 459 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 CXCR2P25025 360 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 GRNP28799 593 aaKnown RBP10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 ARRB2P32121 409 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 ATP1A2P50993 1020 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 PCDH1Q08174 1060 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 DDX39BQ13838 428 aaKnown RBP10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 E2F2Q14209 437 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 RCN2Q14257 317 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 SLC9A5Q14940 896 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 CPSF6Q16630 551 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 HKDC1Q2TB90 917 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 PAGE2BQ5JRK9 111 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 TCHHL1Q5QJ38 904 aaPredicted RBP10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 C1orf189Q5VU69 101 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 MED27Q6P2C8 311 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 TMIGD1Q6UXZ0 262 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 VN1R5Q7Z5H4 357 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 MILR1Q7Z6M3 343 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 PPP1R3BQ86XI6 285 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 TMEM126BQ8IUX1 230 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 CACNA2D3Q8IZS8 1091 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 KRT78Q8N1N4 520 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 RNF175Q8N4F7 328 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 TBC1D19Q8N5T2 526 aa10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 ZNF655Q8N720 491 aaPredicted RBP10.99□□□□□ -0.65
CCDC90B-210ENST00000528149 CSNK1A1LQ8N752 337 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms