RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 PTCHD3Q3KNS1 767 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 GGTA1PQ4G0N0 100 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 C14orf28Q4W4Y0 310 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ZNF542PQ5EBM4 170 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ARL13AQ5H913 290 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 PRR31Q5SQ13 230 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 LIPJQ5W064 366 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 HIST2H2AA3Q6FI13 130 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ARMC6Q6NXE6 501 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ZCCHC8Q6NZY4 707 aaKnown RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 GTF2H2CQ6P1K8 395 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 AGTRAPQ6RW13 159 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 LCTLQ6UWM7 567 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 NAPRTQ6XQN6 538 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 RNF165Q6ZSG1 346 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 TMEM26Q6ZUK4 368 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 CPLX4Q7Z7G2 160 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 THOC6Q86W42 341 aaKnown RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 AMIGO1Q86WK6 493 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 C17orf82Q86X59 251 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 WDR75Q8IWA0 830 aaKnown RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 LRRC34Q8IZ02 419 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 CLYBLQ8N0X4 340 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 KRT78Q8N1N4 520 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ARL14Q8N4G2 192 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 LILRA3Q8N6C8 439 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 L3MBTL4Q8NA19 623 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 KYQ8NBH2 561 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 GPR156Q8NFN8 814 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 TTLQ8NG68 377 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 OR5AR1Q8NGP9 310 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 OR2L8Q8NGY9 312 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 OR4C6Q8NH72 309 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 WDR48Q8TAF3 677 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ADAMTS17Q8TE56 1095 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 SAP25Q8TEE9 199 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ZNF483Q8TF39 744 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 NAT14Q8WUY8 206 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ZNF480Q8WV37 535 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ATOH1Q92858 354 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 EXT2Q93063 718 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ATP6V1E2Q96A05 226 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ZBTB9Q96C00 473 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 PHF21BQ96EK2 531 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 METTL2AQ96IZ6 378 aaKnown RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 CAMK1GQ96NX5 476 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ZNF317Q96PQ6 595 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 YIPF4Q9BSR8 244 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 LRFN3Q9BTN0 628 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 HGH1Q9BTY7 390 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 EFCAB11Q9BUY7 163 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 NTMT1Q9BV86 223 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 GATA5Q9BWX5 397 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 SLC29A3Q9BZD2 475 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 UNKQ9C0B0 810 aaKnown RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 RAB33BQ9H082 229 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 GAREM1Q9H706 876 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 MLXIPLQ9NP71 852 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 CCDC177Q9NQR7 707 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 TMEM74BQ9NUR3 256 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 INTS7Q9NVH2 962 aaKnown RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 NMRK1Q9NWW6 199 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 STOX2Q9P2F5 926 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ZNF624Q9P2J8 865 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 ANKMY1Q9P2S6 941 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 MYOTQ9UBF9 498 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 PFDN2Q9UHV9 154 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 PCTPQ9UKL6 214 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 SNX7Q9UNH6 387 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 SNX6Q9UNH7 406 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 PSMD13Q9UNM6 376 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 APOBEC2Q9Y235 224 aaKnown RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 WDR37Q9Y2I8 494 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 TDRKHQ9Y2W6 561 aaKnown RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 RAP2CQ9Y3L5 183 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 PLEKHM1Q9Y4G2 1056 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 PCYT1BQ9Y5K3 369 aaPredicted RBP3.68□□□□□ -1.82
C11orf54-204ENST00000527003 SLCO1B1Q9Y6L6 691 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 GON4LQ3T8J9 2241 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 PLXNA2O75051 1894 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 NUMA1Q14980 2115 aa3.68□□□□□ -1.82
C11orf54-204ENST00000527003 GOLGA8QA0A0J9YX86 632 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 PIPSLA2A3N6 862 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 GOLGA8OA6NCC3 632 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 OR52A4PA6NMU1 304 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 C2orf74A8MZ97 194 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 B4DGG1 531 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 GOLGA8NF8WBI6 632 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 H0YIV9 168 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 AZIN1O14977 448 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 HDAC3O15379 428 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 TOX3O15405 576 aaPredicted RBP3.67□□□□□ -1.82
C11orf54-204ENST00000527003 PDPK1O15530 556 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 FLRT2O43155 660 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 CCNT2O60583 730 aaKnown RBP3.67□□□□□ -1.82
C11orf54-204ENST00000527003 EDF1O60869 148 aaKnown RBP3.67□□□□□ -1.82
C11orf54-204ENST00000527003 ULK1O75385 1050 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 UBXN7O94888 489 aa3.67□□□□□ -1.82
C11orf54-204ENST00000527003 WDR47O94967 919 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms