RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PADI1Q9ULC6 663 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 PTRH2Q9Y3E5 179 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 NAALAD2Q9Y3Q0 740 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 PCDHB3Q9Y5E6 796 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 TNPO3Q9Y5L0 923 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 PCNX2A6NKB5 2137 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 IGHV3-20A0A0C4DH32 117 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 FITM1A5D6W6 292 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 LRIT2A6NDA9 550 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 GLOD5A6NK44 160 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 A8MUA0 341 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 H3BQF6 201 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 MANBAO00462 879 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 TERTO14746 1132 aaKnown RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 CHST10O43529 356 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 TRIM13O60858 407 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 B4GALT2O60909 372 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 EEDO75530 441 aaKnown RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 SKAP2O75563 359 aaPredicted RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 CRCPO75575 148 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 FKBP9O95302 570 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 OTCP00480 354 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 BPGMP07738 259 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 LINC00032P0C843 101 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 MSL3P1P0C860 447 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ALOX12P18054 663 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 AGXTP21549 392 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 CXCR2P25025 360 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 HMOX2P30519 316 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 PTGER1P34995 402 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ETV4P43268 484 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 GCGRP47871 477 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 SERPINB4P48594 390 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 RAP1GDS1P52306 607 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 HNRNPFP52597 415 aaKnown RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ARSFP54793 590 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 BTG2P78543 158 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 FOXK2Q01167 660 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ID2Q02363 134 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 RGS1Q08116 209 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 LAPTM5Q13571 262 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 IL10RAQ13651 578 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 RAPSNQ13702 412 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 RUNX2Q13950 521 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ABRAXAS2Q15018 415 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 NCF4Q15080 339 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 TBCCQ15814 346 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 HIST2H2ACQ16777 129 aaPredicted RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 NDUFA9Q16795 377 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 MUM1Q2TAK8 710 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 DEFB109BQ30KR1 87 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 FAM214AQ32MH5 1076 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ARL13AQ5H913 290 aaPredicted RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 PAGE2BQ5JRK9 111 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 COLEC12Q5KU26 742 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 SH2D4BQ5SQS7 431 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 HHATQ5VTY9 493 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 LIPMQ5VYY2 423 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 LIPJQ5W064 366 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 HIST2H2AA3Q6FI13 130 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 FAM180BQ6P0A1 224 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF793Q6ZN11 406 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 CCDC81Q6ZN84 652 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 FRMD7Q6ZUT3 714 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 LANCL3Q6ZV70 420 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 GPRIN3Q6ZVF9 776 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 CLNKQ7Z7G1 428 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 NUDCD3Q8IVD9 361 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC22A9Q8IVM8 553 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 LAS2Q8IYD9 372 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 MMP21Q8N119 569 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 TBC1D19Q8N5T2 526 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 KDF1Q8NAX2 398 aaPredicted RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 TMEM52Q8NDY8 209 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 TRPV3Q8NET8 790 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 WDR20Q8TBZ3 569 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 RDH11Q8TC12 318 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 METTL6Q8TCB7 284 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 NT5CQ8TCD5 201 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 STT3BQ8TCJ2 826 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 AGAP11Q8TF27 550 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF473Q8WTR7 871 aaKnown RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 SELENOMQ8WWX9 145 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 STARD8Q92502 1023 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 KIAA1143Q96AT1 154 aaPredicted RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 MS4A6EQ96DS6 147 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 L3HYPDHQ96EM0 354 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 WDR34Q96EX3 536 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC45A3Q96JT2 553 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 ATP6V1G3Q96LB4 118 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 MAGEB10Q96LZ2 347 aaPredicted RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 QRFPRQ96P65 431 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 CCNL2Q96S94 520 aaPredicted RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 MAPKAP1Q9BPZ7 522 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 EFCAB11Q9BUY7 163 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 NTMT1Q9BV86 223 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 CAPS2Q9BXY5 557 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 MS4A8Q9BY19 250 aa4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 MRPL1Q9BYD6 325 aaKnown RBP4.36□□□□□ -1.71
CHMP4A-202ENST00000524955 NLNQ9BYT8 704 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms