RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	CHD2	O14647	1828 aa	Known RBP	10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	HTR3E	A5X5Y0	456 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	PLK4	O00444	970 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	OXSR1	O95747	527 aa	Predicted RBP	10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	CD97	P48960	835 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	ST3GAL4	Q11206	333 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	SLC39A4	Q6P5W5	647 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	TMEM17	Q86X19	198 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	MFSD6L	Q8IWD5	586 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	DENND6B	Q8NEG7	585 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	DNAAF1	Q8NEP3	725 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	FRMD6	Q96NE9	622 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	ZNF347	Q96SE7	839 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	RBM4B	Q9BQ04	359 aa	Known RBP	10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	RBM4	Q9BWF3	364 aa	Known RBP	10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	KAT8	Q9H7Z6	458 aa	Known RBP	10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	ADAP2	Q9NPF8	381 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	PISD	Q9UG56	409 aa		10.01	□□□□□ -0.81
TCF7-223	ENST00000522653	FAM92A	A1XBS5	289 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	SSNA1	O43805	119 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	ATG12	O94817	140 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	EPO	P01588	193 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	POLR2C	P19387	275 aa	Predicted RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	CYP4F3	Q08477	520 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	MERTK	Q12866	999 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	LCP2	Q13094	533 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	NOXRED1	Q6NXP6	359 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	FAM131A	Q6UXB0	335 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	MARVELD2	Q8N4S9	558 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	SLC35C2	Q9NQQ7	365 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	KCNK6	Q9Y257	313 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	ZNF142	P52746	1687 aa	Predicted RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	KLF11	O14901	512 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	ANKRD28	O15084	1053 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	ADAMDEC1	O15204	470 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	FADS2	O95864	444 aa	Known RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	TYRP1	P17643	537 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	GSTM3	P21266	225 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	IDH2	P48735	452 aa	Known RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	CLRN1	P58418	232 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	OPN5	Q6U736	354 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	ABHD5	Q8WTS1	349 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	ECHDC3	Q96DC8	303 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	NPL	Q9BXD5	320 aa	Predicted RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	TWSG1	Q9GZX9	223 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	SLC7A11	Q9UPY5	501 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	TBX1	O43435	398 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	ECI2	O75521	394 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	GOT2	P00505	430 aa	Known RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	SLC15A1	P46059	708 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	PLA2G16	P53816	162 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	MLLT6	P55198	1093 aa	Predicted RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	SOWAHA	Q2M3V2	549 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	SPPL2C	Q8IUH8	684 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	CHCHD4	Q8N4Q1	142 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	TEX29	Q8N6K0	151 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	OR4K14	Q8NGD5	310 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	CNDP2	Q96KP4	475 aa	Known RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	C1orf109	Q9NX04	203 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	POLR3H	Q9Y535	204 aa	Predicted RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	FAM240B	A0A1B0GVZ2	78 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	FADS2P1	A8MWK0	482 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	WNT7A	O00755	349 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	RCBTB2	O95199	551 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	AOC1	P19801	751 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	SLBP	Q14493	270 aa	Known RBP eCLIP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	UPP1	Q16831	310 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	GCNT7	Q6ZNI0	430 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	CCDC36	Q8IYA8	594 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	ZDHHC14	Q8IZN3	488 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	NDRG1	Q92597	394 aa	Known RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	PEX13	Q92968	403 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	DHRS1	Q96LJ7	313 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	HSPA12B	Q96MM6	686 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	HHIP	Q96QV1	700 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	CCNL2	Q96S94	520 aa	Predicted RBP	10	□□□□□ -0.81
TCF7-223	ENST00000522653	PCED1A	Q9H1Q7	454 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	SSR3	Q9UNL2	185 aa		10	□□□□□ -0.81
TCF7-223	ENST00000522653	CDC14C	A4D256	554 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	ZNF99	A8MXY4	864 aa	Predicted RBP	9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	PGRMC2	O15173	223 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	B4GALT2	O60909	372 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	OAZ2	O95190	189 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	MPST	P25325	297 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	CDKL4	Q5MAI5	379 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	CPEB3	Q8NE35	698 aa	Known RBP	9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	TMIE	Q8NEW7	156 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	OR8K5	Q8NH50	307 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	DMRTB1	Q96MA1	342 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	WBP1L	Q9NX94	342 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	ANGPTL1	O95841	491 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	IL32	P24001	234 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	RPS24	P62847	133 aa	Known RBP	9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	PTPN20	Q4JDL3	420 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	PARP8	Q8N3A8	854 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	TOE1	Q96GM8	510 aa	Known RBP	9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	CRB3	Q9BUF7	120 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	ATG10	Q9H0Y0	220 aa		9.99	□□□□□ -0.81
TCF7-223	ENST00000522653	ACP6	Q9NPH0	428 aa		9.99	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms