RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 OR10H1Q9Y4A9 318 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 KANK1Q14678 1352 aa3.78□□□□□ -1.8
SKP1-209ENST00000522552 HSPB6O14558 160 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 ABCD4O14678 606 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 MATN3O15232 486 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 LDB3O75112 727 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 NCR1O76036 304 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 UCP1P25874 307 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 CTNNA2P26232 953 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 SSTR1P30872 391 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 TRIM23P36406 574 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 SLC6A8P48029 635 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 P2RX3P56373 397 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 MAP3K7CLP57077 242 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 NOP14P78316 857 aaKnown RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 MAT1AQ00266 395 aaKnown RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 MBTD1Q05BQ5 628 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 SULT2A1Q06520 285 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 IL10RBQ08334 325 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 FGL1Q08830 312 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 CCDC173Q0VFZ6 552 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 PNRC1Q12796 327 aaPredicted RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 FOXL1Q12952 345 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 PLA2G7Q13093 441 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 DMP1Q13316 513 aaPredicted RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 DRP2Q13474 957 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 KEAP1Q14145 624 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 CHRNA6Q15825 494 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 MAPK6Q16659 721 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 TATDN3Q17R31 274 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 TCERG1LQ5VWI1 586 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 SLC39A4Q6P5W5 647 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 PLXDC2Q6UX71 529 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 DBX2Q6ZNG2 339 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 RBM44Q6ZP01 1051 aaKnown RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 PRR23BQ6ZRT6 265 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 ANO5Q75V66 913 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 TRPM8Q7Z2W7 1104 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 LRRC49Q8IUZ0 686 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 VSTM4Q8IW00 320 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 SFTPA2Q8IWL1 248 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 UEVLDQ8IX04 471 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 GSPT2Q8IYD1 628 aaKnown RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 GPR137CQ8N3F9 429 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 RYBPQ8N488 228 aaPredicted RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 LRRC57Q8N9N7 239 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 ZNF398Q8TD17 642 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 SLC26A7Q8TE54 656 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 UBTD2Q8WUN7 234 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 PHYHIPQ92561 330 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 KAT2BQ92831 832 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 OTULINQ96BN8 352 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 REPS1Q96D71 796 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 C7orf34Q96L11 122 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 CASD1Q96PB1 797 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 VPS35Q96QK1 796 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 FCRL5Q96RD9 977 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 CHRDL1Q9BU40 450 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 MMTAG2Q9BU76 263 aaKnown RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 TDRD1Q9BXT4 1180 aaKnown RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 NPFFR1Q9GZQ6 430 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 NACA2Q9H009 215 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 AUNIPQ9H7T9 357 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 SGK2Q9HBY8 427 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 MLXIPLQ9NP71 852 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 PDGFCQ9NRA1 345 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 ACOXLQ9NUZ1 547 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 NPAP1Q9NZP6 1156 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 RCC2Q9P258 522 aaKnown RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 DBF4Q9UBU7 674 aaPredicted RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 PISDQ9UG56 409 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 TTC7AQ9ULT0 858 aaPredicted RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 PACSIN2Q9UNF0 486 aaPredicted RBP3.78□□□□□ -1.81
SKP1-209ENST00000522552 WDR83OSQ9Y284 106 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 RAP2CQ9Y3L5 183 aa3.78□□□□□ -1.81
SKP1-209ENST00000522552 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.78□□□□□ -1.811e-16■■□□□ 11.8
SKP1-209ENST00000522552 CUX2O14529 1486 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 TRAV26-1A0A087WT03 109 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 A0A087WUV0 522 aaPredicted RBP3.77□□□□□ -1.81
SKP1-209ENST00000522552 CASTOR2A6NHX0 329 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 GABRR3A8MPY1 467 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 KCNU1A8MYU2 1149 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 TMEM150CB9EJG8 249 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 PPIAL4DF5H284 164 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 KRT86O43790 486 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 PEX10O60683 326 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 UGDHO60701 494 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 RPS6KA5O75582 802 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 NEBLO76041 1014 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 NDUFB4O95168 129 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 CLDN7O95471 211 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 GOT2P00505 430 aaKnown RBP3.77□□□□□ -1.81
SKP1-209ENST00000522552 KRT6AP02538 564 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 ALPIP09923 528 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 HAPLN1P10915 354 aaPredicted RBP3.77□□□□□ -1.81
SKP1-209ENST00000522552 CYP19A1P11511 503 aaPredicted RBP3.77□□□□□ -1.81
SKP1-209ENST00000522552 NR0B1P51843 470 aaKnown RBP3.77□□□□□ -1.81
SKP1-209ENST00000522552 SEC61GP60059 68 aa3.77□□□□□ -1.81
SKP1-209ENST00000522552 CSNK2A1P68400 391 aaPredicted RBP3.77□□□□□ -1.81
SKP1-209ENST00000522552 CACNG1Q06432 222 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms