RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 MDH1P40925 334 aaKnown RBP3.68□□□□□ -1.82
SQLE-204ENST00000520493 MAGEA4P43358 317 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 OR3A1P47881 315 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 RASGEF1BQ0VAM2 473 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 SCGB2A2Q13296 93 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 SIRPB2Q5JXA9 342 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 SLC35D3Q5M8T2 416 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 C20orf194Q5TEA3 1177 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 FAM46CQ5VWP2 391 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 CORO6Q6QEF8 472 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 DLEU7Q6UYE1 221 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 ZNF852Q6ZMS4 543 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 KCTD8Q6ZWB6 473 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 TAF8Q7Z7C8 310 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 MMD2Q8IY49 270 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 PRSS35Q8N3Z0 413 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 WDSUB1Q8N9V3 476 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 KIAA0895Q8NCT3 520 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 TMEM185AQ8NFB2 350 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 PIGBQ92521 554 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 TSSK2Q96PF2 358 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 ZNF577Q9BSK1 485 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 TRAF4Q9BUZ4 470 aaPredicted RBP3.68□□□□□ -1.82
SQLE-204ENST00000520493 TEX13BQ9BXU2 312 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 LAT2Q9GZY6 243 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 DDX47Q9H0S4 455 aaKnown RBP3.68□□□□□ -1.82
SQLE-204ENST00000520493 ATG10Q9H0Y0 220 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 CARD9Q9H257 536 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 CPVLQ9H3G5 476 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 RWDD1Q9H446 243 aaPredicted RBP3.68□□□□□ -1.82
SQLE-204ENST00000520493 TLE6Q9H808 572 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 C10orf88Q9H8K7 445 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 KCNMB3Q9NPA1 279 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 CHST11Q9NPF2 352 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 NGBQ9NPG2 151 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 SDR39U1Q9NRG7 319 aaPredicted RBP3.68□□□□□ -1.82
SQLE-204ENST00000520493 MRPL17Q9NRX2 175 aaKnown RBP3.68□□□□□ -1.82
SQLE-204ENST00000520493 FLRT3Q9NZU0 649 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 MAN1B1Q9UKM7 699 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 FAF1Q9UNN5 650 aaPredicted RBP3.68□□□□□ -1.82
SQLE-204ENST00000520493 RABL2BQ9UNT1 228 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 KCNJ14Q9UNX9 436 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 EXOC7Q9UPT5 735 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 KLK4Q9Y5K2 254 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 KIAA1217Q5T5P2 1943 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 PFASO15067 1338 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 LOC101059948A0A1B0GTJ6 334 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 H0YIG0 161 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 MAGEB2O15479 319 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 OR6B1O95007 311 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 TPM2P07951 284 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 SKILP12757 684 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 NR1D1P20393 614 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 MSH3P20585 1137 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 CA4P22748 312 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 EPHA2P29317 976 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 CSTF2P33240 577 aaKnown RBP eCLIP3.67□□□□□ -1.82
SQLE-204ENST00000520493 OR3A3P47888 321 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 SMSP52788 366 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 SRP54P61011 504 aaKnown RBP3.67□□□□□ -1.82
SQLE-204ENST00000520493 DMPKQ09013 629 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 PPP1R8Q12972 351 aaKnown RBP3.67□□□□□ -1.82
SQLE-204ENST00000520493 ACKR1Q16570 336 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 EPC2Q52LR7 807 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 OR6B2Q6IFH4 312 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 ZNF770Q6IQ21 691 aaPredicted RBP3.67□□□□□ -1.82
SQLE-204ENST00000520493 FUT10Q6P4F1 479 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 CD164L2Q6UWJ8 174 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 ISLR2Q6UXK2 745 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 ADAMTSL2Q86TH1 951 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 ASPGQ86U10 573 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 TMEM126BQ8IUX1 230 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 CCDC60Q8IWA6 550 aaPredicted RBP3.67□□□□□ -1.82
SQLE-204ENST00000520493 MAPKAPK5-AS1Q8N8E1 139 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 OR11H4Q8NGC9 324 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 PYCR2Q96C36 320 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 TXN2Q99757 166 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 DDX50Q9BQ39 737 aaKnown RBP3.67□□□□□ -1.82
SQLE-204ENST00000520493 ZNF559Q9BR84 538 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 IDI2Q9BXS1 227 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 ACPTQ9BZG2 426 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 CUEDC2Q9H467 287 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 ECHDC1Q9NTX5 307 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 DCAF16Q9NXF7 216 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 ANKMY1Q9P2S6 941 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 STUB1Q9UNE7 303 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 ZNF510Q9Y2H8 683 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 RRP15Q9Y3B9 282 aaKnown RBP3.67□□□□□ -1.82
SQLE-204ENST00000520493 KIF3AQ9Y496 699 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 U3KQV3 271 aa3.67□□□□□ -1.82
SQLE-204ENST00000520493 TRAV18A0A075B6X5 111 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 A0A1B0GWJ7 208 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 TMEM129A0AVI4 362 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 F8WDY8 70 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 ZNF197O14709 1029 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 TEX28O15482 410 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 CLDN3O15551 220 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 AKR7A3O95154 331 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 PTBP3O95758 552 aaKnown RBP3.66□□□□□ -1.82
SQLE-204ENST00000520493 PAK4O96013 591 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms