RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 LRRC70Q7Z2Q7 622 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 CCDC91Q7Z6B0 441 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 ISCA2Q86U28 154 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 PDSS2Q86YH6 399 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 RELL1Q8IUW5 271 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 KBTBD2Q8IY47 623 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 ZADH2Q8N4Q0 377 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 ANKRD53Q8N9V6 530 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 TTLQ8NG68 377 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 NT5CQ8TCD5 201 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 SLC44A1Q8WWI5 657 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 PTCD3Q96EY7 689 aaKnown RBP13.4□□□□□ -0.26
VEGFA-221ENST00000520265 AGAP4Q96P64 663 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 CD244Q9BZW8 370 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 VN1R1Q9GZP7 353 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 LHPPQ9H008 270 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 EPS8L2Q9H6S3 715 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 COPS7BQ9H9Q2 264 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-221ENST00000520265 RIC8BQ9NVN3 520 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 GPRC5BQ9NZH0 403 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 C19orf25Q9UFG5 118 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-221ENST00000520265 SLC22A7Q9Y694 548 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 FASNP49327 2511 aaKnown RBP13.39□□□□□ -0.27
VEGFA-221ENST00000520265 IGHV3-20A0A0C4DH32 117 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 OR2W5A6NFC9 320 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 TRIM49D1C9J1S8 452 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 ERI3O43414 337 aaKnown RBP13.39□□□□□ -0.27
VEGFA-221ENST00000520265 B4GALT2O60909 372 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 SH3BGRLO75368 114 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 SEC24DO94855 1032 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-221ENST00000520265 WISP1O95388 367 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 COX6A1P12074 109 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 BTN3A2P78410 334 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 KCNC4Q03721 635 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 ACTN3Q08043 901 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-221ENST00000520265 DDX39BQ13838 428 aaKnown RBP13.39□□□□□ -0.27
VEGFA-221ENST00000520265 DOC2AQ14183 400 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 ABRAXAS2Q15018 415 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 IGFBP7Q16270 282 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 CDKL4Q5MAI5 379 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 NIPAL1Q6NVV3 410 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 LANCL3Q6ZV70 420 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 CENPLQ8N0S6 344 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-221ENST00000520265 SHISA5Q8N114 240 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 CYP4X1Q8N118 509 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 SIRT6Q8N6T7 355 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 TEX9Q8N6V9 391 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 LRRN4CLQ8ND94 238 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 UTP15Q8TED0 518 aaKnown RBP13.39□□□□□ -0.27
VEGFA-221ENST00000520265 ATOH8Q96SQ7 321 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 SMAD5Q99717 465 aaKnown RBP13.39□□□□□ -0.27
VEGFA-221ENST00000520265 EFCAB11Q9BUY7 163 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 TGIF2Q9GZN2 237 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 KLHL31Q9H511 634 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 PTGFRNQ9P2B2 879 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 PTBP2Q9UKA9 531 aaKnown RBP13.39□□□□□ -0.27
VEGFA-221ENST00000520265 ASB1Q9Y576 335 aa13.39□□□□□ -0.27
VEGFA-221ENST00000520265 A0A088AWK7 358 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 IGHV1-45A0A0A0MS14 117 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 HMX2A2RU54 273 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 K7EPI3 171 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 CHST10O43529 356 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 GALR3O60755 368 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-221ENST00000520265 WFS1O76024 890 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 KLHL2O95198 593 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 ALDOAP04075 364 aaKnown RBP13.38□□□□□ -0.27
VEGFA-221ENST00000520265 SERPINA6P08185 405 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 CELA2AP08217 269 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 EPB42P16452 691 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 ZNF10P21506 573 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-221ENST00000520265 JAK1P23458 1154 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 KCNC1P48547 511 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 PLA2G16P53816 162 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 LAPTM5Q13571 262 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 ACAP2Q15057 778 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 NSDHLQ15738 373 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 LGSNQ5TDP6 509 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 SLC6A19Q695T7 634 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 JMJD6Q6NYC1 403 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-221ENST00000520265 ATCAYQ86WG3 371 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 KLHDC8AQ8IYD2 350 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 CPT1CQ8TCG5 803 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 BRIX1Q8TDN6 353 aaKnown RBP13.38□□□□□ -0.27
VEGFA-221ENST00000520265 TBC1D20Q96BZ9 403 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 SARGQ9BW04 601 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 ZNF552Q9H707 407 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-221ENST00000520265 MLXIPLQ9NP71 852 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 C5AR2Q9P296 337 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 PLAAQ9Y263 795 aa13.38□□□□□ -0.27
VEGFA-221ENST00000520265 CFAP46Q8IYW2 2715 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 SMIM24O75264 130 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 FHP07954 510 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 CNTFP26441 200 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 HPDP32754 393 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-221ENST00000520265 GGT5P36269 586 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 CD97P48960 835 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 CSRP3P50461 194 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 ARG2P78540 354 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 TGM3Q08188 693 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 BTBD16Q32M84 506 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms