RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 IMPDH2P12268 514 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 ICAM2P13598 275 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 STMN1P16949 149 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 ALOX12P18054 663 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 GNLYP22749 145 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 VARSP26640 1264 aaKnown RBP8.82□□□□□ -1
HDAC3-215ENST00000519474 XCR1P46094 333 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 UQCRFS1P47985 274 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 SLC6A12P48065 614 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 GLRBP48167 497 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 SESN3P58005 492 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 REEP5Q00765 189 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 EEF1A2Q05639 463 aaKnown RBP8.82□□□□□ -1
HDAC3-215ENST00000519474 RBBP5Q15291 538 aaKnown RBP8.82□□□□□ -1
HDAC3-215ENST00000519474 OR4D1Q15615 310 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 EIF2S3LQ2VIR3 472 aaKnown RBP8.82□□□□□ -1
HDAC3-215ENST00000519474 FBXO48Q5FWF7 155 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 CDKL4Q5MAI5 379 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 ISLR2Q6UXK2 745 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 LANCL3Q6ZV70 420 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 CPEB2Q7Z5Q1 589 aaKnown RBP8.82□□□□□ -1
HDAC3-215ENST00000519474 GPSM1Q86YR5 675 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 EFCAB3Q8N7B9 438 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 TRPV3Q8NET8 790 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 OR5T3Q8NGG3 340 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 ZCCHC10Q8TBK6 192 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 UTP15Q8TED0 518 aaKnown RBP8.82□□□□□ -1
HDAC3-215ENST00000519474 HAS2Q92819 552 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 KIAA1191Q96A73 305 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 TSPAN17Q96FV3 270 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 PEX11GQ96HA9 241 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 C16orf45Q96MC5 204 aaPredicted RBP8.82□□□□□ -1
HDAC3-215ENST00000519474 AIF1LQ9BQI0 150 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 SLC6A16Q9GZN6 736 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 RASSF4Q9H2L5 321 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 NT5DC2Q9H857 520 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 LANCL2Q9NS86 450 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 PLA2G3Q9NZ20 509 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 HCN3Q9P1Z3 774 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 TXNDC16Q9P2K2 825 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 ZNF490Q9ULM2 529 aaPredicted RBP8.82□□□□□ -1
HDAC3-215ENST00000519474 VPS4AQ9UN37 437 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 NTNG1Q9Y2I2 539 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 DYRK1BQ9Y463 629 aa8.82□□□□□ -1
HDAC3-215ENST00000519474 COPG1Q9Y678 874 aaKnown RBP8.82□□□□□ -1
HDAC3-215ENST00000519474 HELZ2Q9BYK8 2649 aaKnown RBP8.81□□□□□ -1
HDAC3-215ENST00000519474 NCF1BA6NI72 391 aaPredicted RBP8.81□□□□□ -1
HDAC3-215ENST00000519474 CYSRT1A8MQ03 144 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 NCF1CA8MVU1 366 aaPredicted RBP8.81□□□□□ -1
HDAC3-215ENST00000519474 FAM227AF5H4B4 570 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 NDUFS4O43181 175 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 RDH16O75452 317 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 WFS1O76024 890 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 TBX6O95947 436 aaPredicted RBP8.81□□□□□ -1
HDAC3-215ENST00000519474 SERPINA7P05543 415 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 SERPINA6P08185 405 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 SLC35G6P0C7Q6 338 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 ZNF888P0CJ79 500 aaPredicted RBP8.81□□□□□ -1
HDAC3-215ENST00000519474 C8orf89P0DMQ9 161 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 ITGAMP11215 1152 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 NCF1P14598 390 aaPredicted RBP8.81□□□□□ -1
HDAC3-215ENST00000519474 IL10P22301 178 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 SOX11P35716 441 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 HNF4AP41235 474 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 RAB8AP61006 207 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 RAB10P61026 200 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 ATP6V0D1P61421 351 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 RHAGQ02094 409 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 CKAP4Q07065 602 aaKnown RBP8.81□□□□□ -1
HDAC3-215ENST00000519474 MFAP5Q13361 173 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 HERC3Q15034 1050 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 WHAMMP3Q1A5X7 153 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 DEFB134Q4QY38 66 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 UBAP2Q5T6F2 1119 aaKnown RBP8.81□□□□□ -1
HDAC3-215ENST00000519474 B3GNTL1Q67FW5 361 aaPredicted RBP8.81□□□□□ -1
HDAC3-215ENST00000519474 SULT1C3Q6IMI6 304 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 H3F3CQ6NXT2 135 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 LINC00696Q6ZRV3 163 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 ANKRD37Q7Z713 158 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 TMPRSS11BQ86T26 416 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 ADAMTSL2Q86TH1 951 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 ATCAYQ86WG3 371 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 TBC1D19Q8N5T2 526 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 BRIX1Q8TDN6 353 aaKnown RBP8.81□□□□□ -1
HDAC3-215ENST00000519474 PPP4R1Q8TF05 950 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 METTL21AQ8WXB1 218 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 TM9SF4Q92544 642 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 NXNL1Q96CM4 212 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 WDR77Q9BQA1 342 aaPredicted RBP8.81□□□□□ -1
HDAC3-215ENST00000519474 TMEM79Q9BSE2 394 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 TUBB6Q9BUF5 446 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 CAPS2Q9BXY5 557 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 STMN3Q9NZ72 180 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 PTGFRNQ9P2B2 879 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 COPG2Q9UBF2 871 aa8.81□□□□□ -1
HDAC3-215ENST00000519474 SHANK1Q9Y566 2161 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 SCN2AQ99250 2005 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 SPTA1P02549 2419 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 hCG_2014768A0A024R1R8 64 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 LRIT2A6NDA9 550 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms