RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PACRGLQ8N7B6 248 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 CADM4Q8NFZ8 388 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 OR2L3Q8NG85 312 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 OR13H1Q8NG92 308 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 OR7A2PQ8NGA2 310 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 MAFAQ8NHW3 353 aaPredicted RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 WDR48Q8TAF3 677 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 CREB3L4Q8TEY5 395 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 TSACCQ96A04 125 aaPredicted RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 CLDN23Q96B33 292 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 RGMAQ96B86 450 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 FAM120BQ96EK7 910 aaKnown RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 REXO5Q96IC2 774 aaKnown RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 PRAP1Q96NZ9 151 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 PANX1Q96RD7 426 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 NR1H4Q96RI1 486 aaPredicted RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 MYOCQ99972 504 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 CENPKQ9BS16 269 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 INPP5KQ9BT40 448 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 IER2Q9BTL4 223 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 THUMPD3Q9BV44 507 aaKnown RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 GSDMCQ9BYG8 508 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 TMEM168Q9H0V1 697 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 IKZF5Q9H5V7 419 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 MAGIXQ9H6Y5 334 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 RPF2Q9H7B2 306 aaKnown RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 DDX31Q9H8H2 851 aaKnown RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 COPS7BQ9H9Q2 264 aaPredicted RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 SLC6A20Q9NP91 592 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 MRPS30Q9NP92 439 aaKnown RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 AGPAT4Q9NRZ5 378 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 SLC6A13Q9NSD5 602 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 POT1Q9NUX5 634 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 ZNF282Q9UDV7 671 aaPredicted RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 EGFL7Q9UHF1 273 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 PNMA8BQ9ULN7 279 aaPredicted RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 CYP8B1Q9UNU6 501 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 INVSQ9Y283 1065 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 CA5BQ9Y2D0 317 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 BTBD3Q9Y2F9 522 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 DTNAQ9Y4J8 743 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 KIR2DS5A0A0G2JLQ3 304 aa8□□□□□ -1.13
RNF4-220ENST00000513578 A0A0G2JNG1 304 aa8□□□□□ -1.13
RNF4-220ENST00000513578 C1orf226A1L170 272 aa8□□□□□ -1.13
RNF4-220ENST00000513578 KRBA1A5PL33 1030 aa8□□□□□ -1.13
RNF4-220ENST00000513578 METTL12A8MUP2 240 aa8□□□□□ -1.13
RNF4-220ENST00000513578 KIR2DS3K7RE56 304 aa8□□□□□ -1.13
RNF4-220ENST00000513578 CLIC1O00299 241 aa8□□□□□ -1.13
RNF4-220ENST00000513578 PLPP1O14494 284 aa8□□□□□ -1.13
RNF4-220ENST00000513578 YY2O15391 372 aa8□□□□□ -1.13
RNF4-220ENST00000513578 NDUFS4O43181 175 aa8□□□□□ -1.13
RNF4-220ENST00000513578 TNFSF14O43557 240 aa8□□□□□ -1.13
RNF4-220ENST00000513578 AKAP10O43572 662 aa8□□□□□ -1.13
RNF4-220ENST00000513578 DENRO43583 198 aaKnown RBP8□□□□□ -1.13
RNF4-220ENST00000513578 GPR37L1O60883 481 aa8□□□□□ -1.13
RNF4-220ENST00000513578 PRSS23O95084 383 aa8□□□□□ -1.13
RNF4-220ENST00000513578 EPN2O95208 641 aa8□□□□□ -1.13
RNF4-220ENST00000513578 LRATO95237 230 aa8□□□□□ -1.13
RNF4-220ENST00000513578 EML2O95834 649 aa8□□□□□ -1.13
RNF4-220ENST00000513578 CHRM5P08912 532 aaPredicted RBP8□□□□□ -1.13
RNF4-220ENST00000513578 UQCRBP14927 111 aa8□□□□□ -1.13
RNF4-220ENST00000513578 IL9P15248 144 aa8□□□□□ -1.13
RNF4-220ENST00000513578 ZNF26P17031 533 aaPredicted RBP8□□□□□ -1.13
RNF4-220ENST00000513578 FASP25445 335 aa8□□□□□ -1.13
RNF4-220ENST00000513578 AK4P27144 223 aaPredicted RBP8□□□□□ -1.13
RNF4-220ENST00000513578 PSMB5P28074 263 aa8□□□□□ -1.13
RNF4-220ENST00000513578 ACTR1BP42025 376 aa8□□□□□ -1.13
RNF4-220ENST00000513578 FRKP42685 505 aaPredicted RBP8□□□□□ -1.13
RNF4-220ENST00000513578 CDKN2CP42773 168 aa8□□□□□ -1.13
RNF4-220ENST00000513578 BLKP51451 505 aa8□□□□□ -1.13
RNF4-220ENST00000513578 ACTR1AP61163 376 aa8□□□□□ -1.13
RNF4-220ENST00000513578 UBE2IP63279 158 aaKnown RBP8□□□□□ -1.13
RNF4-220ENST00000513578 MEF2AQ02078 507 aaPredicted RBP8□□□□□ -1.13
RNF4-220ENST00000513578 TFF2Q03403 129 aa8□□□□□ -1.13
RNF4-220ENST00000513578 KLC1Q07866 573 aa8□□□□□ -1.13
RNF4-220ENST00000513578 C2orf80Q0P641 193 aa8□□□□□ -1.13
RNF4-220ENST00000513578 EIF2B5Q13144 721 aaKnown RBP8□□□□□ -1.13
RNF4-220ENST00000513578 VEZF1Q14119 521 aa8□□□□□ -1.13
RNF4-220ENST00000513578 SIM2Q14190 667 aaPredicted RBP8□□□□□ -1.13
RNF4-220ENST00000513578 KIR2DS5Q14953 304 aa8□□□□□ -1.13
RNF4-220ENST00000513578 MLC1Q15049 377 aa8□□□□□ -1.13
RNF4-220ENST00000513578 HKDC1Q2TB90 917 aa8□□□□□ -1.13
RNF4-220ENST00000513578 GTDC1Q4AE62 458 aa8□□□□□ -1.13
RNF4-220ENST00000513578 TBCELQ5QJ74 424 aa8□□□□□ -1.13
RNF4-220ENST00000513578 INTS11Q5TA45 600 aaKnown RBP8□□□□□ -1.13
RNF4-220ENST00000513578 ANO7Q6IWH7 933 aa8□□□□□ -1.13
RNF4-220ENST00000513578 HMBOX1Q6NT76 420 aa8□□□□□ -1.13
RNF4-220ENST00000513578 MAMSTRQ6ZN01 415 aa8□□□□□ -1.13
RNF4-220ENST00000513578 PAQR7Q86WK9 346 aa8□□□□□ -1.13
RNF4-220ENST00000513578 IFNEQ86WN2 208 aa8□□□□□ -1.13
RNF4-220ENST00000513578 NUDT13Q86X67 352 aa8□□□□□ -1.13
RNF4-220ENST00000513578 ADHFE1Q8IWW8 467 aa8□□□□□ -1.13
RNF4-220ENST00000513578 ADGRF3Q8IZF5 1079 aa8□□□□□ -1.13
RNF4-220ENST00000513578 EID3Q8N140 333 aa8□□□□□ -1.13
RNF4-220ENST00000513578 SLC22A18ASQ8N1D0 253 aa8□□□□□ -1.13
RNF4-220ENST00000513578 SPEM1Q8N4L4 309 aa8□□□□□ -1.13
RNF4-220ENST00000513578 C2orf73Q8N5S3 287 aaPredicted RBP8□□□□□ -1.13
RNF4-220ENST00000513578 MFSD2AQ8NA29 543 aa8□□□□□ -1.13
RNF4-220ENST00000513578 MFSD9Q8NBP5 474 aa8□□□□□ -1.13
RNF4-220ENST00000513578 SRFBP1Q8NEF9 429 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms