RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 HSMCR30P0CW71 290 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ICAM2P13598 275 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GLB1P16278 677 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 RYKP34925 604 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 RAD52P43351 418 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF41P51814 821 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GMFBP60983 142 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MRPS35P82673 323 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 RING1Q06587 406 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 EIF3IQ13347 325 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CLCA4Q14CN2 919 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TTMPQ5BVD1 217 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SIRPB2Q5JXA9 342 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ZCCHC12Q6PEW1 402 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KLHL17Q6TDP4 642 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CRELD2Q6UXH1 353 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SPATA21Q7Z572 469 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ARMC8Q8IUR7 673 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF527Q8NB42 609 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 OR4K2Q8NGD2 314 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 RDH11Q8TC12 318 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 APOBEC4Q8WW27 367 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SLC38A2Q96QD8 506 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 HES7Q9BYE0 225 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 FAM192AQ9GZU8 254 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ATP13A2Q9NQ11 1180 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ZDHHC3Q9NYG2 299 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SEC14L3Q9UDX4 400 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GPR160Q9UJ42 338 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 RPH3AQ9Y2J0 694 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PCDHB1Q9Y5F3 818 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TRBV11-1A0A0K0K1C0 115 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 A0A1W2PQC6 194 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SERTM1A2A2V5 107 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 K7ERQ8 282 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TGFB1I1O43294 461 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GDF9O60383 454 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 F10P00742 488 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 S100A9P06702 114 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SAGP10523 405 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ERCC2P18074 760 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CCNA2P20248 432 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 POU3F3P20264 500 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ATP6V1B2P21281 511 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ACSL1P33121 698 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 NOVP48745 357 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PRR5P85299 388 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 B4GALNT1Q00973 533 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 IQCCQ4KMZ1 466 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CMPK2Q5EBM0 449 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GARNL3Q5VVW2 1013 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CWF19L1Q69YN2 538 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 BICRALQ6AI39 1079 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 NEPROQ6NW34 567 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MTFR2Q6P444 385 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 NXPE4Q6UWF7 544 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TTLL10Q6ZVT0 673 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 NLRP14Q86W24 1093 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 BPHLQ86WA6 291 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PHF13Q86YI8 300 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 LILRB2Q8N423 598 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TRMT10AQ8TBZ6 339 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KBTBD7Q8WVZ9 684 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SYN2Q92777 582 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ECHDC3Q96DC8 303 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MIPEPQ99797 713 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF670Q9BS34 389 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CRB3Q9BUF7 120 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TLR10Q9BXR5 811 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 DEFB126Q9BYW3 111 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MTG2Q9H4K7 406 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CAB39LQ9H9S4 337 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 LMBRD1Q9NUN5 540 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TRPS1Q9UHF7 1281 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 IKZF2Q9UKS7 526 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 RABL2BQ9UNT1 228 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MAP4K5Q9Y4K4 846 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KIR2DS5A0A0G2JLQ3 304 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 A0A0G2JNG1 304 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 A0A1B0GTH6 734 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ANKRD34BA5PLL1 514 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 EFCAB10A6NFE3 127 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 FAM25AB3EWG3 89 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 FAM25CB3EWG5 89 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 FAM25GB3EWG6 89 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TRIM49D1C9J1S8 452 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KIR2DS3K7RE56 304 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 RNF225M0QZC1 329 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 NR5A2O00482 541 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TOR1BO14657 336 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ULK1O75385 1050 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PSIP1O75475 530 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CDC123O75794 336 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SCGNO76038 276 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 STK17BO94768 372 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 NDST3O95803 873 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ALOX5P09917 674 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CCDC166P0CW27 439 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ACPPP15309 386 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TIMP2P16035 220 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms