RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 K7EPI3 171 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 RDH16O75452 317 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 STATHP02808 62 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 ALDOAP04075 364 aaKnown RBP18.79■□□□□ 0.6
SFXN1-209ENST00000508290 COX6A1P12074 109 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 CASP2P42575 452 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 MAGEA12P43365 314 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 PIK3CGP48736 1102 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 DLG1Q12959 904 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 E2F2Q14209 437 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 SYT16Q17RD7 645 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 MINDY4Q4G0A6 757 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 DEFB134Q4QY38 66 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 XKR6Q5GH73 641 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 JMJD6Q6NYC1 403 aaPredicted RBP18.79■□□□□ 0.6
SFXN1-209ENST00000508290 PRSS41Q7RTY9 318 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 PDSS2Q86YH6 399 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 ZADH2Q8N4Q0 377 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 UTP15Q8TED0 518 aaKnown RBP18.79■□□□□ 0.6
SFXN1-209ENST00000508290 CREB3L4Q8TEY5 395 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 KCTD4Q8WVF5 259 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 GAL3ST3Q96A11 431 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 NXNL1Q96CM4 212 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 TUBB6Q9BUF5 446 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 VN1R1Q9GZP7 353 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 HCN3Q9P1Z3 774 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 EXOC1LA0A1B0GW35 172 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 CCNT2O60583 730 aaKnown RBP18.78■□□□□ 0.6
SFXN1-209ENST00000508290 SERPINA7P05543 415 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 RBP1P09455 135 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 ALDH18A1P54886 795 aaKnown RBP18.78■□□□□ 0.6
SFXN1-209ENST00000508290 IRF8Q02556 426 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 TGM3Q08188 693 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 NAA30Q147X3 362 aaPredicted RBP18.78■□□□□ 0.6
SFXN1-209ENST00000508290 C18orf21Q32NC0 220 aaPredicted RBP18.78■□□□□ 0.6
SFXN1-209ENST00000508290 MFSD4BQ5TF39 518 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 TMEM151BQ8IW70 566 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 ADAMTS18Q8TE60 1221 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.78■□□□□ 0.6
SFXN1-209ENST00000508290 EXT2Q93063 718 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 TBC1D20Q96BZ9 403 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 MTBPQ96DY7 904 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 MOCOSQ96EN8 888 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 FAR2Q96K12 515 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 NPLQ9BXD5 320 aaPredicted RBP18.78■□□□□ 0.6
SFXN1-209ENST00000508290 RHBGQ9H310 441 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 EPS8L2Q9H6S3 715 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 L2HGDHQ9H9P8 463 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 ZNF160Q9HCG1 818 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 FETUBQ9UGM5 382 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 ADGRE2Q9UHX3 823 aa18.78■□□□□ 0.6
SFXN1-209ENST00000508290 PCSK5Q92824 1860 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 BSNQ9UPA5 3926 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 FFAR3O14843 346 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 GPR42O15529 346 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 FHP07954 510 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 ZNF888P0CJ79 500 aaPredicted RBP18.77■□□□□ 0.6
SFXN1-209ENST00000508290 SMIM10L1P0DMW3 83 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 GFAPP14136 432 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 EPB42P16452 691 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 KCNC1P48547 511 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 KCNC4Q03721 635 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 RAPSNQ13702 412 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 SETDB1Q15047 1291 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 CRB2Q5IJ48 1285 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 IGFL2Q6UWQ7 119 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 LCA5Q86VQ0 697 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.77■□□□□ 0.6
SFXN1-209ENST00000508290 PLPP5Q8NEB5 264 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 SRFBP1Q8NEF9 429 aaKnown RBP18.77■□□□□ 0.6
SFXN1-209ENST00000508290 PPP4R1Q8TF05 950 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 SMIM10Q96HG1 83 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 THOC3Q96J01 351 aaKnown RBP18.77■□□□□ 0.6
SFXN1-209ENST00000508290 LMF1Q96S06 567 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 ROGDIQ9GZN7 287 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 VPS11Q9H270 941 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 SLAMF7Q9NQ25 335 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 B3GNT3Q9Y2A9 372 aa18.77■□□□□ 0.6
SFXN1-209ENST00000508290 ANKRD12Q6UB98 2062 aa18.77■□□□□ 0.59
SFXN1-209ENST00000508290 NUP210LQ5VU65 1888 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 TTLL8A6PVC2 850 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 MAGEB17A8MXT2 336 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 POC1B-GALNT4F8VUJ3 575 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 UBXN8O00124 270 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 PSMD12O00232 456 aaPredicted RBP18.76■□□□□ 0.59
SFXN1-209ENST00000508290 KLK8O60259 260 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 SORBS2O94875 1100 aaKnown RBP18.76■□□□□ 0.59
SFXN1-209ENST00000508290 SNRPAP09012 282 aaKnown RBP18.76■□□□□ 0.59
SFXN1-209ENST00000508290 RHOXF2BP0C7M4 288 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 RNH1P13489 461 aaKnown RBP18.76■□□□□ 0.59
SFXN1-209ENST00000508290 MTHFD2P13995 350 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 FOXK1P85037 733 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 IRF9Q00978 393 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 HYAL2Q12891 473 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 CHIT1Q13231 466 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 DOC2AQ14183 400 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 RCN2Q14257 317 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 ADPRMQ3LIE5 342 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 TOR1AIP1Q5JTV8 583 aa18.76■□□□□ 0.59
SFXN1-209ENST00000508290 SLC6A19Q695T7 634 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms