RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-222	ENST00000508238		A0A0A6YYC8	382 aa	Predicted RBP	7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	TCP11X1	B4DZS4	312 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238		I3L1I5	382 aa	Predicted RBP	7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	MAP2K7	O14733	419 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	TTI1	O43156	1089 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	BMP10	O95393	424 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	CBX6	O95503	412 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	SERPINA7	P05543	415 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	ANXA5	P08758	320 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	COX6A1	P12074	109 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	IL10	P22301	178 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	GNLY	P22749	145 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	CXCR2	P25025	360 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	AVPR1B	P47901	424 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	MGAT5	Q09328	741 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	B3GNTL1	Q67FW5	361 aa	Predicted RBP	7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	TMEM205	Q6UW68	189 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	ISLR2	Q6UXK2	745 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	MBOAT1	Q6ZNC8	495 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	ADCK2	Q7Z695	626 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	CUZD1	Q86UP6	607 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	SLC26A11	Q86WA9	606 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	ZC3HC1	Q86WB0	502 aa	Known RBP	7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	PLD3	Q8IV08	490 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	ZC3H7A	Q8IWR0	971 aa	Known RBP	7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	KBTBD2	Q8IY47	623 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	CAMKV	Q8NCB2	501 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	PSMF1	Q92530	271 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	FBXL8	Q96CD0	374 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	MMAB	Q96EY8	250 aa	Predicted RBP	7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	IMMP1L	Q96LU5	166 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	WDR77	Q9BQA1	342 aa	Predicted RBP	7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	MESP1	Q9BRJ9	268 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	SLC29A3	Q9BZD2	475 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	ATG10	Q9H0Y0	220 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	SRA1	Q9HD15	236 aa	Known RBP	7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	PPAN	Q9NQ55	473 aa	Known RBP	7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	ARL15	Q9NXU5	204 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	NOP53	Q9NZM5	478 aa	Known RBP	7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	WHRN	Q9P202	907 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	SLC17A6	Q9P2U8	582 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	PYCARD	Q9ULZ3	195 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	CHMP2B	Q9UQN3	213 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	SLC22A7	Q9Y694	548 aa		7.53	□□□□□ -1.2
UBE2D3-222	ENST00000508238	IGHV1-45	A0A0A0MS14	117 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	NSG1	A0A0A6YYJ2	146 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	EFCAB8	A8MWE9	144 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	EIF3H	O15372	352 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	LCMT2	O60294	686 aa	Known RBP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	KLHL18	O94889	574 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	HEXB	P07686	556 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	CELA3A	P09093	270 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	PRR35	P0CG20	571 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	ICAM2	P13598	275 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	ZNF37A	P17032	561 aa	Predicted RBP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	GRK3	P35626	688 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	BCL6	P41182	706 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	TSFM	P43897	325 aa	Known RBP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	RPL21	P46778	160 aa	Known RBP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	UQCRFS1	P47985	274 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	CCR8	P51685	355 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	AP2B1	P63010	937 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	CDKL1	Q00532	357 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	PDIA2	Q13087	525 aa	Known RBP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	MFAP5	Q13361	173 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	PWP1	Q13610	501 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	PPP1R3A	Q16821	1122 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	PRR30	Q53SZ7	412 aa	Predicted RBP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	FHL5	Q5TD97	284 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	NIPAL1	Q6NVV3	410 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	RPUSD3	Q6P087	351 aa	Known RBP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	SBSN	Q6UWP8	590 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	TMEM207	Q6UWW9	146 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	MAATS1	Q7Z4T9	603 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	ASPG	Q86U10	573 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	PRSS58	Q8IYP2	241 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	AFAP1L2	Q8N4X5	818 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	NKAP	Q8N5F7	415 aa	Known RBP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	CISD2	Q8N5K1	135 aa	Known RBP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	GPATCH11	Q8N954	259 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	MFSD9	Q8NBP5	474 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	SPATA4	Q8NEY3	305 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	OR9A4	Q8NGU2	314 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	DNAJB14	Q8TBM8	379 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	SLC13A3	Q8WWT9	602 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	C8orf44	Q96CB5	159 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	C19orf60	Q96EN9	201 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	CFAP36	Q96G28	342 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	THOC3	Q96J01	351 aa	Known RBP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	OR4K3	Q96R72	315 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	CYTH2	Q99418	400 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	KRT12	Q99456	494 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	OLFM1	Q99784	485 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	ERP44	Q9BS26	406 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	TRIM51	Q9BSJ1	452 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	ILKAP	Q9H0C8	392 aa	Predicted RBP	7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	ZNF700	Q9H0M5	742 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	RHOJ	Q9H4E5	214 aa		7.52	□□□□□ -1.21
UBE2D3-222	ENST00000508238	EPS8L2	Q9H6S3	715 aa		7.52	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms