RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 CRCPO75575 148 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 CLEC3AO75596 197 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 HSPA4LO95757 839 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 SLC35G6P0C7Q6 338 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 IL1RNP18510 177 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 ITGAXP20702 1163 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 SLC1A6P48664 564 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 FOXL2P58012 376 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 RGS1Q08116 209 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 IFT88Q13099 833 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 PWP1Q13610 501 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 TBC1D25Q3MII6 688 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 SH2D4BQ5SQS7 431 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 FRG2Q64ET8 278 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 IGF2-ASQ6U949 168 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 C6orf15Q6UXA7 325 aaPredicted RBP12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 TMEM151BQ8IW70 566 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 TTLQ8NG68 377 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 OR9A4Q8NGU2 314 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 UTP15Q8TED0 518 aaKnown RBP12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 SELENOMQ8WWX9 145 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 ZNF75CPQ92670 426 aaPredicted RBP12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 MR1Q95460 341 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 MS4A6EQ96DS6 147 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 FRG2BQ96QU4 278 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 SORT1Q99523 831 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 SORBS1Q9BX66 1292 aaKnown RBP12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 MS4A8Q9BY19 250 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 ELOVL6Q9H5J4 265 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 MANSC1Q9H8J5 431 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 MED4Q9NPJ6 270 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 TXLNGQ9NUQ3 528 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 INTS9Q9NV88 658 aaKnown RBP12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 SNX6Q9UNH7 406 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 STK38LQ9Y2H1 464 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 TMEM184BQ9Y519 407 aaPredicted RBP12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 FER1L5A0AVI2 2057 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 LRIT2A6NDA9 550 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 SRRM3A6NNA2 597 aaPredicted RBP12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 TMEM114B3SHH9 223 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 SGK494L7N484 410 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 MEN1O00255 615 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 RTCAO00442 366 aaKnown RBP12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 TXNDC9O14530 226 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 DSCR3O14972 297 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 AZIN1O14977 448 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 RAD1O60671 282 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 ENO1P06733 434 aaKnown RBP12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 SERPINA6P08185 405 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 RORAP35398 523 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 PLA2G16P53816 162 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 ARSFP54793 590 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 NAA20P61599 178 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 OLR1P78380 273 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 BTN3A2P78410 334 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 MAT1AQ00266 395 aaKnown RBP12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 SRSF6Q13247 344 aaKnown RBP12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 ABRAXAS2Q15018 415 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 SYT16Q17RD7 645 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 MUM1Q2TAK8 710 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 FAM214AQ32MH5 1076 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 DEFB134Q4QY38 66 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 ZNF385CQ66K41 422 aaPredicted RBP12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 RHBDD2Q6NTF9 364 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 UBE3DQ7Z6J8 389 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 PDSS2Q86YH6 399 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 DSELQ8IZU8 1212 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 ZNF781Q8N8C0 355 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 AMER3Q8N944 861 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 DYDC1Q8WWB3 177 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 REPS1Q96D71 796 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 ZNF578Q96N58 590 aaPredicted RBP12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 GBP5Q96PP8 586 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 TRMOQ9BU70 441 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 SLC29A3Q9BZD2 475 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 CHST8Q9H2A9 424 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 CCDC86Q9H6F5 360 aaKnown RBP12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 EML4Q9HC35 981 aaKnown RBP12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 ENAMQ9NRM1 1142 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 SLC22A11Q9NSA0 550 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 PNPOQ9NVS9 261 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 SRPK3Q9UPE1 567 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 TRAF6Q9Y4K3 522 aa12.6□□□□□ -0.39
PDLIM7-212ENST00000504380 SETXQ7Z333 2677 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 A0A1B0GX78 115 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 STMND1H3BQB6 276 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 ERI3O43414 337 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 RDH16O75452 317 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 KLHL18O94889 574 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 KRT6AP02538 564 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 KRT6BP04259 564 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 HBQ1P09105 142 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 SMIM10L1P0DMW3 83 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 GRK2P25098 689 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 PIK3CBP42338 1070 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 KRT6CP48668 564 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 STXBP1P61764 594 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 HMGCS1Q01581 520 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 NDUFA9Q16795 377 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 DEPDC1Q5TB30 811 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms