RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 REXO4Q9GZR2 422 aaKnown RBP12.92□□□□□ -0.34
CPNE1-227ENST00000498056 ACTR5Q9H9F9 607 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-227ENST00000498056 BRF2Q9HAW0 419 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 CUTCQ9NTM9 273 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 MRPS2Q9Y399 296 aaKnown RBP12.92□□□□□ -0.34
CPNE1-227ENST00000498056 TSC22D4Q9Y3Q8 395 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 B3GALT1Q9Y5Z6 326 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 HYKKA2RU49 373 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 ZNF860A6NHJ4 632 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 FOXE1O00358 373 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-227ENST00000498056 RGS14O43566 566 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 CPNE3O75131 537 aaKnown RBP12.91□□□□□ -0.34
CPNE1-227ENST00000498056 KIAA0754O94854 1291 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 TNFSF15O95150 251 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 FGF4P08620 206 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 HSD3B1P14060 373 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 HSD3B2P26439 372 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 SSR2P43308 183 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 PLA2G16P53816 162 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 HYAL2Q12891 473 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 MUM1Q2TAK8 710 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.91□□□□□ -0.34
CPNE1-227ENST00000498056 SPDYAQ5MJ70 313 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 TMEM164Q5U3C3 297 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 C1orf189Q5VU69 101 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 TMEM214Q6NUQ4 689 aaKnown RBP12.91□□□□□ -0.34
CPNE1-227ENST00000498056 TTLL10Q6ZVT0 673 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 CHSY3Q70JA7 882 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 PRSS41Q7RTY9 318 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
CPNE1-227ENST00000498056 DTWD1Q8N5C7 304 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 NXPE2Q96DL1 559 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 TM4SF19Q96DZ7 209 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 FAR2Q96K12 515 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 TAAR9Q96RI9 348 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 SERPINI1Q99574 410 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 DDA1Q9BW61 102 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 MRPL1Q9BYD6 325 aaKnown RBP12.91□□□□□ -0.34
CPNE1-227ENST00000498056 AICDAQ9GZX7 198 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 TUBB1Q9H4B7 451 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 KLHL31Q9H511 634 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 POLR1BQ9H9Y6 1135 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 ANKHQ9HCJ1 492 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 NPHS2Q9NP85 383 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 FBXO8Q9NRD0 319 aa12.91□□□□□ -0.34
CPNE1-227ENST00000498056 DHCR7Q9UBM7 475 aaKnown RBP12.91□□□□□ -0.34
CPNE1-227ENST00000498056 SEC16AO15027 2179 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 A0A0A6YYC8 382 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 ATP6AP2A0A1C7CYW4 349 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 FITM1A5D6W6 292 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 LRIT2A6NDA9 550 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 C9orf172C9J069 976 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 H3BMH7 237 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 I3L1I5 382 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 SLC28A1O00337 649 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 RTCAO00442 366 aaKnown RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 ATP6AP2O75787 350 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 MED26O95402 600 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 TBX6O95947 436 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 B3GALT4O96024 378 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 RBMS1P29558 406 aaKnown RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 LSP1P33241 339 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 HK2P52789 917 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 SNRPNP63162 240 aaKnown RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 RPL38P63173 70 aaKnown RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 ZNF33BQ06732 778 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 TGM3Q08188 693 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 SLC9A5Q14940 896 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 GALNTL6Q49A17 601 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 DEFB134Q4QY38 66 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 XKR7Q5GH72 579 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 BPHLQ86WA6 291 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 LRRC34Q8IZ02 419 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 GBP7Q8N8V2 638 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 OR2L5Q8NG80 312 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 OR2T11Q8NH01 316 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 UTP15Q8TED0 518 aaKnown RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 TUBGCP3Q96CW5 907 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 MS4A6EQ96DS6 147 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 TEFMQ96QE5 360 aaKnown RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 SCNM1Q9BWG6 230 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 SORBS1Q9BX66 1292 aaKnown RBP12.9□□□□□ -0.34
CPNE1-227ENST00000498056 FAM107BQ9H098 131 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 PFDN4Q9NQP4 134 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 RIC8BQ9NVN3 520 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 FOXJ2Q9P0K8 574 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 VPS29Q9UBQ0 182 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 GIMAP2Q9UG22 337 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 PCDHB3Q9Y5E6 796 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 PCDHGA8Q9Y5G5 932 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 USH1CQ9Y6N9 552 aa12.9□□□□□ -0.34
CPNE1-227ENST00000498056 A0A088AWK7 358 aa12.89□□□□□ -0.35
CPNE1-227ENST00000498056 GOLGA8QA0A0J9YX86 632 aa12.89□□□□□ -0.35
CPNE1-227ENST00000498056 A0A1B0GX78 115 aa12.89□□□□□ -0.35
CPNE1-227ENST00000498056 GOLGA8OA6NCC3 632 aa12.89□□□□□ -0.35
CPNE1-227ENST00000498056 TRPC5OSA6NMA1 111 aa12.89□□□□□ -0.35
CPNE1-227ENST00000498056 GOLGA8NF8WBI6 632 aa12.89□□□□□ -0.35
CPNE1-227ENST00000498056 SLCO1B7G3V0H7 640 aa12.89□□□□□ -0.35
CPNE1-227ENST00000498056 PLPP1O14494 284 aa12.89□□□□□ -0.35
CPNE1-227ENST00000498056 DSCR3O14972 297 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms