RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 ALOX12P18054 663 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 ITGA3P26006 1051 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 HNRNPH1P31943 449 aaKnown RBP16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 CD97P48960 835 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 SERPINB9P50453 376 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 CHIT1Q13231 466 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 PWP1Q13610 501 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 PFKFB4Q16877 469 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 FAM83EQ2M2I3 478 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 MINDY4Q4G0A6 757 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 FAM219BQ5XKK7 198 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 TMIGD1Q6UXZ0 262 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 TRMT10CQ7L0Y3 403 aaKnown RBP16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 LRRC70Q7Z2Q7 622 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 TGIF2Q9GZN2 237 aa16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 ZBTB20Q9HC78 741 aaPredicted RBP16.6■□□□□ 0.25
RHBDD3-207ENST00000496342 H2AFYO75367 372 aaKnown RBP16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 SH3BGRLO75368 114 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 SIX3O95343 332 aaPredicted RBP16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 IGHEP01854 428 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 GFAPP14136 432 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 KLRB1Q12918 225 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 SLC29A2Q14542 456 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 SETDB1Q15047 1291 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 ACAP2Q15057 778 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 TAOK1Q7L7X3 1001 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 RNF175Q8N4F7 328 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 TEX9Q8N6V9 391 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 RHEBL1Q8TAI7 183 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 SCYL1Q96KG9 808 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 ZNF552Q9H707 407 aaPredicted RBP16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 ANKZF1Q9H8Y5 726 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 ATP13A2Q9NQ11 1180 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 XPR1Q9UBH6 696 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 OPTCQ9UBM4 332 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 ZNF180Q9UJW8 692 aa16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 ZNF490Q9ULM2 529 aaPredicted RBP16.59■□□□□ 0.25
RHBDD3-207ENST00000496342 FOXO6A8MYZ6 492 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 K7EPI3 171 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 CHST10O43529 356 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 KRT38O76015 456 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 SMIM10L1P0DMW3 83 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 IRF8Q02556 426 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 TLE1Q04724 770 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 AIMP2Q13155 320 aaKnown RBP16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 MYBPC3Q14896 1274 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 HERC3Q15034 1050 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 PCOLCEQ15113 449 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 KLC3Q6P597 504 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 ATG14Q6ZNE5 492 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 KRT78Q8N1N4 520 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 RBMXL3Q8N7X1 1067 aaKnown RBP16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 TEX19Q8NA77 164 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 TRPV3Q8NET8 790 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 TSLPQ969D9 159 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 PTCD3Q96EY7 689 aaKnown RBP16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 SMIM10Q96HG1 83 aa16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 SMAD5Q99717 465 aaKnown RBP16.58■□□□□ 0.24
RHBDD3-207ENST00000496342 SHANK1Q9Y566 2161 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 IGHV1-45A0A0A0MS14 117 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 SYCE1LA8MT33 242 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 KLK8O60259 260 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 HPP00738 406 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 SHBGP04278 402 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 SERPINA6P08185 405 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 CXCR2P25025 360 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 VWA5B1Q5TIE3 1220 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 ADGRD1Q6QNK2 874 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 TMEM205Q6UW68 189 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 RPS27LQ71UM5 84 aaKnown RBP16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 ABHD13Q7L211 337 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 CCDC91Q7Z6B0 441 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 PTGR2Q8N8N7 351 aaPredicted RBP16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 WDR34Q96EX3 536 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 THOC3Q96J01 351 aaKnown RBP16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 CAPS2Q9BXY5 557 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 RHBGQ9H310 441 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 EHD1Q9H4M9 534 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 LANCL2Q9NS86 450 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 COPG2Q9UBF2 871 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 ANAPC2Q9UJX6 822 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 ZNF451Q9Y4E5 1061 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 CSAG2Q9Y5P2 127 aa16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 V9GYY5 206 aaPredicted RBP16.57■□□□□ 0.24
RHBDD3-207ENST00000496342 NSG1A0A0A6YYJ2 146 aa16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 FAM227AF5H4B4 570 aa16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 GOLGA8RI6L899 631 aa16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 J3QKU1 62 aa16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 ERI3O43414 337 aaKnown RBP16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 B4GALT2O60909 372 aa16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 SEC24DO94855 1032 aaPredicted RBP16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 SNRPAP09012 282 aaKnown RBP16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 SBK3P0C264 359 aa16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 C8orf89P0DMQ9 161 aa16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 PCNAP12004 261 aa16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 CASRP41180 1078 aa16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 ALDH18A1P54886 795 aaKnown RBP16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 MLLT10P55197 1068 aa16.56■□□□□ 0.24
RHBDD3-207ENST00000496342 BTN3A2P78410 334 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms