RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SULT1C3Q6IMI6 304 aa22.84■■□□□ 1.25
HLA-C-209ENST00000495835 H3F3CQ6NXT2 135 aa22.84■■□□□ 1.25
HLA-C-209ENST00000495835 ANKRD37Q7Z713 158 aa22.84■■□□□ 1.25
HLA-C-209ENST00000495835 GPSM1Q86YR5 675 aa22.84■■□□□ 1.25
HLA-C-209ENST00000495835 C17orf53Q8N3J3 647 aaPredicted RBP22.84■■□□□ 1.25
HLA-C-209ENST00000495835 M1APQ8TC57 530 aa22.84■■□□□ 1.25
HLA-C-209ENST00000495835 UTP15Q8TED0 518 aaKnown RBP22.84■■□□□ 1.25
HLA-C-209ENST00000495835 TBC1D20Q96BZ9 403 aa22.84■■□□□ 1.25
HLA-C-209ENST00000495835 PEX11GQ96HA9 241 aa22.84■■□□□ 1.25
HLA-C-209ENST00000495835 SMIM10Q96HG1 83 aa22.84■■□□□ 1.25
HLA-C-209ENST00000495835 EHD1Q9H4M9 534 aa22.84■■□□□ 1.25
HLA-C-209ENST00000495835 CAB39LQ9H9S4 337 aa22.84■■□□□ 1.25
HLA-C-209ENST00000495835 LRRC4CQ9HCJ2 640 aa22.84■■□□□ 1.25
HLA-C-209ENST00000495835 TRAV17A0A0B4J275 112 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 DDAH2O95865 285 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 UQCRHP07919 91 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 ITGAMP11215 1152 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 GP1BBP13224 206 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 HPDP32754 393 aaPredicted RBP22.83■■□□□ 1.25
HLA-C-209ENST00000495835 TNFSF10P50591 281 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 RHAGQ02094 409 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 MRPL49Q13405 166 aaKnown RBP22.83■■□□□ 1.25
HLA-C-209ENST00000495835 ELOAQ14241 798 aaKnown RBP22.83■■□□□ 1.25
HLA-C-209ENST00000495835 RBBP5Q15291 538 aaKnown RBP22.83■■□□□ 1.25
HLA-C-209ENST00000495835 NSDHLQ15738 373 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 EIF2S3LQ2VIR3 472 aaKnown RBP22.83■■□□□ 1.25
HLA-C-209ENST00000495835 KBTBD12Q3ZCT8 623 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 DEFB134Q4QY38 66 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 ABHD17BQ5VST6 288 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 ZDHHC24Q6UX98 284 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 SLCO4C1Q6ZQN7 724 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 LANCL3Q6ZV70 420 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 CTAGE3PQ8IX95 158 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 KRT78Q8N1N4 520 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 SIRT6Q8N6T7 355 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 ST6GALNAC3Q8NDV1 305 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 CREB3L4Q8TEY5 395 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 NTNG1Q9Y2I2 539 aa22.83■■□□□ 1.25
HLA-C-209ENST00000495835 ANKUB1A6NFN9 424 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 CDK2AP1O14519 115 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 CHST10O43529 356 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 ZNF888P0CJ79 500 aaPredicted RBP22.82■■□□□ 1.24
HLA-C-209ENST00000495835 STXBP1P61764 594 aaKnown RBP22.82■■□□□ 1.24
HLA-C-209ENST00000495835 GUCY2DQ02846 1103 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 HYAL2Q12891 473 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 TMIGD1Q6UXZ0 262 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 CCDC91Q7Z6B0 441 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 CCDC25Q86WR0 208 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 PDPRQ8NCN5 879 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 OR1N1Q8NGS0 311 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 SSC4DQ8WTU2 575 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 FAR1Q8WVX9 515 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 KIAA1191Q96A73 305 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 LPAR4Q99677 370 aa22.82■■□□□ 1.24
HLA-C-209ENST00000495835 PHGDHO43175 533 aaKnown RBP22.81■■□□□ 1.24
HLA-C-209ENST00000495835 SEC24DO94855 1032 aaPredicted RBP22.81■■□□□ 1.24
HLA-C-209ENST00000495835 CRABP2P29373 138 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 GDF5P43026 501 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 ACTN3Q08043 901 aaPredicted RBP22.81■■□□□ 1.24
HLA-C-209ENST00000495835 ABRAXAS2Q15018 415 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 BTBD16Q32M84 506 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 QSOX2Q6ZRP7 698 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 PPM1NQ8N819 430 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 CATSPER1Q8NEC5 780 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 OR5T3Q8NGG3 340 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 PRR7Q8TB68 274 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 STAG3L4Q8TBR4 150 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 GRHL3Q8TE85 626 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 FBF1Q8TES7 1133 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 ZNF354BQ96LW1 612 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 MMP25Q9NPA2 562 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 DNAJC11Q9NVH1 559 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 STMN3Q9NZ72 180 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 HIVEP3Q5T1R4 2406 aa22.81■■□□□ 1.24
HLA-C-209ENST00000495835 CCDC189A1A4V9 331 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 ZNF860A6NHJ4 632 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 CLGNO14967 610 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 TAPBPO15533 448 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 STK16O75716 305 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 CELA2AP08217 269 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 RNH1P13489 461 aaKnown RBP22.8■■□□□ 1.24
HLA-C-209ENST00000495835 EDN3P14138 238 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 C8orf74Q6P047 294 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 FAM180AQ6UWF9 173 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 CEP128Q6ZU80 1094 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 GAL3ST3Q96A11 431 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 WDR34Q96EX3 536 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 NPLQ9BXD5 320 aaPredicted RBP22.8■■□□□ 1.24
HLA-C-209ENST00000495835 NMRAL1Q9HBL8 299 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 WWOXQ9NZC7 414 aa22.8■■□□□ 1.24
HLA-C-209ENST00000495835 PTBP2Q9UKA9 531 aaKnown RBP22.8■■□□□ 1.24
HLA-C-209ENST00000495835 IGHV3-20A0A0C4DH32 117 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 BLACEA4D250 179 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 NCF1BA6NI72 391 aaPredicted RBP22.79■■□□□ 1.24
HLA-C-209ENST00000495835 NCF1CA8MVU1 366 aaPredicted RBP22.79■■□□□ 1.24
HLA-C-209ENST00000495835 CLEC3AO75596 197 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 WDPCPO95876 746 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 NCF1P14598 390 aaPredicted RBP22.79■■□□□ 1.24
HLA-C-209ENST00000495835 LAPTM5Q13571 262 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 TRADDQ15628 312 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms