RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SEC24DO94855 1032 aaPredicted RBP31.33■■■□□ 2.61
CBX4-203ENST00000494546 S100BP04271 92 aaPredicted RBP31.33■■■□□ 2.61
CBX4-203ENST00000494546 CRABP2P29373 138 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 RAB8AP61006 207 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 NIPAL1Q6NVV3 410 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 RIPOR1Q6ZS17 1223 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 CPEB2Q7Z5Q1 589 aaKnown RBP31.33■■■□□ 2.61
CBX4-203ENST00000494546 TBC1D1Q86TI0 1168 aaPredicted RBP31.33■■■□□ 2.61
CBX4-203ENST00000494546 SNX31Q8N9S9 440 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 PSMF1Q92530 271 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 OR1F2PQ96R84 312 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 LMF1Q96S06 567 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 KLHL31Q9H511 634 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 ALG9Q9H6U8 611 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 DMGDHQ9UI17 866 aaKnown RBP31.33■■■□□ 2.61
CBX4-203ENST00000494546 PCDHGA10Q9Y5H3 936 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 CHST10O43529 356 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 STK16O75716 305 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 ICAM2P13598 275 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 TFEBP19484 476 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 IL10P22301 178 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 GGT5P36269 586 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 HYAL2Q12891 473 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 BMPR2Q13873 1038 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 UBAP2LQ14157 1087 aaKnown RBP31.32■■■□□ 2.6
CBX4-203ENST00000494546 UAP1Q16222 522 aaPredicted RBP31.32■■■□□ 2.6
CBX4-203ENST00000494546 TOR1AIP1Q5JTV8 583 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 TMIGD1Q6UXZ0 262 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 ANKRD37Q7Z713 158 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP31.32■■■□□ 2.6
CBX4-203ENST00000494546 PDPRQ8NCN5 879 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 CREB3L4Q8TEY5 395 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 IMMP1LQ96LU5 166 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 SLC29A3Q9BZD2 475 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 ASF1BQ9NVP2 202 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 NINJ2Q9NZG7 142 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 GPRC5BQ9NZH0 403 aa31.32■■■□□ 2.6
CBX4-203ENST00000494546 CLGNO14967 610 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 SERPINA6P08185 405 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 CTAGE8P0CG41 777 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 ITGAMP11215 1152 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 PHBP35232 272 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 KCNC1P48547 511 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 DLG1Q12959 904 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 MROH9Q5TGP6 573 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 CTAGE4Q8IX94 777 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 KRT78Q8N1N4 520 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 STAG3L4Q8TBR4 150 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 IFT81Q8WYA0 676 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 CCT6BQ92526 530 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 TBC1D20Q96BZ9 403 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 NMRAL1Q9HBL8 299 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 LANCL2Q9NS86 450 aa31.31■■■□□ 2.6
CBX4-203ENST00000494546 TCP11X1B4DZS4 312 aa31.3■■■□□ 2.6
CBX4-203ENST00000494546 FHP07954 510 aa31.3■■■□□ 2.6
CBX4-203ENST00000494546 LTA4HP09960 611 aaKnown RBP31.3■■■□□ 2.6
CBX4-203ENST00000494546 SOX11P35716 441 aa31.3■■■□□ 2.6
CBX4-203ENST00000494546 AGTR2P50052 363 aa31.3■■■□□ 2.6
CBX4-203ENST00000494546 AP2B1P63010 937 aa31.3■■■□□ 2.6
CBX4-203ENST00000494546 ABRAXAS2Q15018 415 aa31.3■■■□□ 2.6
CBX4-203ENST00000494546 CEP128Q6ZU80 1094 aa31.3■■■□□ 2.6
CBX4-203ENST00000494546 IGSF5Q9NSI5 407 aa31.3■■■□□ 2.6
CBX4-203ENST00000494546 PTBP2Q9UKA9 531 aaKnown RBP31.3■■■□□ 2.6
CBX4-203ENST00000494546 COPG1Q9Y678 874 aaKnown RBP31.3■■■□□ 2.6
CBX4-203ENST00000494546 CCNT2O60583 730 aaKnown RBP31.29■■■□□ 2.6
CBX4-203ENST00000494546 ARG2P78540 354 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 RHAGQ02094 409 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 ZNF169Q14929 603 aaPredicted RBP31.29■■■□□ 2.6
CBX4-203ENST00000494546 NSDHLQ15738 373 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 PDK4Q16654 411 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 BTBD16Q32M84 506 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 UBAP2Q5T6F2 1119 aaKnown RBP31.29■■■□□ 2.6
CBX4-203ENST00000494546 B3GNTL1Q67FW5 361 aaPredicted RBP31.29■■■□□ 2.6
CBX4-203ENST00000494546 ISCA2Q86U28 154 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 FAM26EQ8N5C1 309 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 CATSPER1Q8NEC5 780 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 TTLQ8NG68 377 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 PLA2G3Q9NZ20 509 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 NUDT4Q9NZJ9 180 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 ACOT9Q9Y305 439 aa31.29■■■□□ 2.6
CBX4-203ENST00000494546 ASH1LQ9NR48 2969 aaKnown RBP31.28■■■□□ 2.6
CBX4-203ENST00000494546 SUPT3HB4E1H0 165 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 B4GALT2O60909 372 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 SUPT3HO75486 399 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 TUBB4AP04350 444 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 JAK1P23458 1154 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 STXBP1P61764 594 aaKnown RBP31.28■■■□□ 2.6
CBX4-203ENST00000494546 SRSF1Q07955 248 aaKnown RBP eCLIP31.28■■■□□ 2.6
CBX4-203ENST00000494546 TLR1Q15399 786 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 XKR6Q5GH73 641 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 PLPP5Q8NEB5 264 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 TSLPQ969D9 159 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 NXNL1Q96CM4 212 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 AICDAQ9GZX7 198 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 SHANK1Q9Y566 2161 aa31.28■■■□□ 2.6
CBX4-203ENST00000494546 RELNP78509 3460 aa31.27■■■□□ 2.6
CBX4-203ENST00000494546 DYTNA2CJ06 578 aa31.27■■■□□ 2.6
CBX4-203ENST00000494546 C4orf51C9J302 202 aa31.27■■■□□ 2.6
CBX4-203ENST00000494546 KIF2AO00139 706 aaPredicted RBP31.27■■■□□ 2.6
CBX4-203ENST00000494546 SMIM10L1P0DMW3 83 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms