RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 ZSCAN5DPP0CG00 497 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 MGAT1P26572 445 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 PPP2R2AP63151 447 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 SNX1Q13596 522 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 CUL1Q13616 776 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 CES3Q6UWW8 571 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 QSOX2Q6ZRP7 698 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 UBE2R2Q712K3 238 aaPredicted RBP16.53■□□□□ 0.24
NUP50-218ENST00000493456 CENPUQ71F23 418 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 C17orf64Q86WR6 236 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 AFAP1L2Q8N4X5 818 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 OR5T3Q8NGG3 340 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 GIMAP7Q8NHV1 300 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 CCDC138Q96M89 665 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 CCDC68Q9H2F9 335 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 TSPY26PQ9H489 355 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 FEZF1A0PJY2 475 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 EIF3FO00303 357 aaPredicted RBP16.52■□□□□ 0.24
NUP50-218ENST00000493456 GALR3O60755 368 aaPredicted RBP16.52■□□□□ 0.24
NUP50-218ENST00000493456 PTMSP20962 102 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 CCND1P24385 295 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 RFC3P40938 356 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 CDK16Q00536 496 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 NEPROQ6NW34 567 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 PAOXQ6QHF9 649 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 RAD9BQ6WBX8 426 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 CYHR1Q6ZMK1 362 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 SLC13A5Q86YT5 568 aaPredicted RBP16.52■□□□□ 0.24
NUP50-218ENST00000493456 MMP21Q8N119 569 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 CYP4Z2PQ8N1L4 340 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 TXLNBQ8N3L3 684 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 MFSD9Q8NBP5 474 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 MYRIPQ8NFW9 859 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 SEC16BQ96JE7 1060 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 DEFB126Q9BYW3 111 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 TSGA10Q9BZW7 698 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 TRIM5Q9C035 493 aa16.52■□□□□ 0.24
NUP50-218ENST00000493456 SCN3AQ9NY46 2000 aa16.52■□□□□ 0.23
NUP50-218ENST00000493456 KLK8O60259 260 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 LCMT2O60294 686 aaKnown RBP16.51■□□□□ 0.23
NUP50-218ENST00000493456 KLK2P20151 261 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 PMPCAQ10713 525 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 KIF5AQ12840 1032 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 CCDC71Q8IV32 467 aaPredicted RBP16.51■□□□□ 0.23
NUP50-218ENST00000493456 CYP4X1Q8N118 509 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 ZNF740Q8NDX6 193 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 NRGNQ92686 78 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 PTCHD1Q96NR3 888 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 SARGQ9BW04 601 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 SH2B3Q9UQQ2 575 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 MED16Q9Y2X0 877 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 DHRS7Q9Y394 339 aa16.51■□□□□ 0.23
NUP50-218ENST00000493456 FAM237BA0A1B0GVD1 139 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 CTAGE9A4FU28 777 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 NDUFS4O43181 175 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 CHST10O43529 356 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 DRD2P14416 443 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 ALOX12P18054 663 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 TPSB2P20231 275 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 NUP107P57740 925 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 PWP1Q13610 501 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 TPSAB1Q15661 275 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 EMC4Q5J8M3 183 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 ZNF470Q6ECI4 717 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 LRRC8EQ6NSJ5 796 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 LCTLQ6UWM7 567 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 RPRMLQ8N4K4 120 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 TMEM156Q8N614 296 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.5■□□□□ 0.23
NUP50-218ENST00000493456 NFAM1Q8NET5 270 aaPredicted RBP16.5■□□□□ 0.23
NUP50-218ENST00000493456 OR5M3Q8NGP4 307 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 CD200R1Q8TD46 325 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 SLC6A16Q9GZN6 736 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 CLK4Q9HAZ1 481 aaKnown RBP16.5■□□□□ 0.23
NUP50-218ENST00000493456 CCM2LQ9NUG4 571 aaPredicted RBP16.5■□□□□ 0.23
NUP50-218ENST00000493456 DNAJB12Q9NXW2 375 aaKnown RBP16.5■□□□□ 0.23
NUP50-218ENST00000493456 COMMD10Q9Y6G5 202 aa16.5■□□□□ 0.23
NUP50-218ENST00000493456 TCRBV16S1A1N1A0A5B0 115 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 B4GALT2O60909 372 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 TUBB4AP04350 444 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 CDH1P12830 882 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 FLNAP21333 2647 aaKnown RBP16.49■□□□□ 0.23
NUP50-218ENST00000493456 CLCN2P51788 898 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 DEFB134Q4QY38 66 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 DRICH1Q6PGQ1 229 aaPredicted RBP16.49■□□□□ 0.23
NUP50-218ENST00000493456 KIAA0408Q6ZU52 694 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 ABHD13Q7L211 337 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 PIWIL4Q7Z3Z4 852 aaKnown RBP16.49■□□□□ 0.23
NUP50-218ENST00000493456 CPNE9Q8IYJ1 553 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 ARMC2Q8NEN0 867 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 OR52N2Q8NGI0 321 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 PHF3Q92576 2039 aaKnown RBP16.49■□□□□ 0.23
NUP50-218ENST00000493456 GPR21Q99679 349 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 HAUS8Q9BT25 410 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 TIMMDC1Q9NPL8 285 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 PRDM9Q9NQV7 894 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 ST6GALNAC2Q9UJ37 374 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 EDARQ9UNE0 448 aa16.49■□□□□ 0.23
NUP50-218ENST00000493456 HRNRQ86YZ3 2850 aaPredicted RBP16.49■□□□□ 0.23
NUP50-218ENST00000493456 ACANP16112 2415 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms