RNA–Protein interactions for RNA: ENST00000493380.5

FRMD4A-208, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-208ENST00000493380 PLPP5Q8NEB5 264 aa12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 NFAM1Q8NET5 270 aaPredicted RBP12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 UTP15Q8TED0 518 aaKnown RBP12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 THAP3Q8WTV1 239 aaPredicted RBP12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 NEIL2Q969S2 332 aa12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 MTFMTQ96DP5 389 aaKnown RBP12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 RHBGQ9H310 441 aa12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 LIN28AQ9H9Z2 209 aaKnown RBP12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 UTP6Q9NYH9 597 aaKnown RBP12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 LRFN1Q9P244 771 aa12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 C19orf25Q9UFG5 118 aaPredicted RBP12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 TRMT6Q9UJA5 497 aaKnown RBP12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 ZNF223Q9UK11 482 aaPredicted RBP12.6□□□□□ -0.39
FRMD4A-208ENST00000493380 AKAP6Q13023 2319 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 PINLYPA6NC86 204 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 MAGEB17A8MXT2 336 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 AP3B1O00203 1094 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 NDC80O14777 642 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 PFDN6O15212 129 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 SLC25A12O75746 678 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 GUCA1CO95843 209 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 AHSGP02765 367 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 FHP07954 510 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 ESRRAP11474 423 aaPredicted RBP12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 MLNP12872 115 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 PTGER4P35408 488 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 AGTR2P50052 363 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 ITGA8P53708 1063 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 GPR85P60893 370 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 EXT1Q16394 746 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 RNASEH2BQ5TBB1 312 aaKnown RBP12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 SLC25A25Q6KCM7 469 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 TRMT10BQ6PF06 316 aaKnown RBP12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 CCDC137Q6PK04 289 aaKnown RBP12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 RPTNQ6XPR3 784 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 RASGEF1CQ8N431 466 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 OR4K1Q8NGD4 311 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 MCOLN3Q8TDD5 553 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 SNF8Q96H20 258 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 DMRTA2Q96SC8 542 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 LPAR4Q99677 370 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 PARVBQ9HBI1 364 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 TEKT2Q9UIF3 430 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 CLDN16Q9Y5I7 305 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 ZFHX3Q15911 3703 aa12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 PHF3Q92576 2039 aaKnown RBP12.59□□□□□ -0.39
FRMD4A-208ENST00000493380 IGKV3D-11A0A0A0MRZ8 115 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 A0A0G2JMM0 328 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 A0A1W2PPB8 328 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 A0A1W2PRS3 328 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 KIR3DP1A8MWS1 328 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 NME2P1O60361 137 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 CLDN14O95500 239 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 ALOX12P18054 663 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 NME2P22392 152 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 MEOX1P50221 254 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 MLF1P58340 268 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 RBPJQ06330 500 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 ZNF460Q14592 562 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 TESK1Q15569 626 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 CYP1B1Q16678 543 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 ADNP2Q6IQ32 1131 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 XKRXQ6PP77 449 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 MDGA2Q7Z553 956 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 PCGF5Q86SE9 256 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 RPS19BP1Q86WX3 136 aaKnown RBP12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 ABHD11Q8NFV4 315 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 OR56A3Q8NH54 315 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 MAIP1Q8WWC4 291 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 TBC1D20Q96BZ9 403 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 THAP11Q96EK4 314 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 PTCHD1Q96NR3 888 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 XAB2Q9HCS7 855 aaKnown RBP12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 CHST11Q9NPF2 352 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 VPS9D1Q9Y2B5 631 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 PCDHGB6Q9Y5F9 930 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 SLC22A7Q9Y694 548 aa12.58□□□□□ -0.4
FRMD4A-208ENST00000493380 A0A1B0GTH9 108 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 NKX2-6A6NCS4 301 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 CDC7O00311 574 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 HS6ST1O60243 411 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 PIAS1O75925 651 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 KRT38O76015 456 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 PDE9AO76083 593 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 C8GP07360 202 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 SLC35G6P0C7Q6 338 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 CD46P15529 392 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 ABOP16442 354 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 SCTRP47872 440 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 SARNPP82979 210 aaKnown RBP12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 REEP5Q00765 189 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 FBXO48Q5FWF7 155 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 SBSNQ6UWP8 590 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 ZNF662Q6ZS27 426 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 CD163Q86VB7 1156 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 SULF2Q8IWU5 870 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 MYO1HQ8N1T3 1032 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 SLC5A8Q8N695 610 aa12.57□□□□□ -0.4
FRMD4A-208ENST00000493380 ACBD4Q8NC06 268 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms