RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CYP1B1Q16678 543 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 KBTBD12Q3ZCT8 623 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 DUPD1Q68J44 220 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 CAPN13Q6MZZ7 669 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-212ENST00000492407 AGTRAPQ6RW13 159 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 GDF7Q7Z4P5 450 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 GAS2L3Q86XJ1 694 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 RELL1Q8IUW5 271 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 PLD3Q8IV08 490 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 DENND6AQ8IWF6 608 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 BEST3Q8N1M1 668 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 ARMC10Q8N2F6 343 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 SPC24Q8NBT2 197 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 PHF10Q8WUB8 498 aaKnown RBP8.6□□□□□ -1.03
HDAC3-212ENST00000492407 ATL1Q8WXF7 558 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 MAGOHBQ96A72 148 aaKnown RBP8.6□□□□□ -1.03
HDAC3-212ENST00000492407 PBKQ96KB5 322 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 SIGLEC10Q96LC7 697 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 OLFM1Q99784 485 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 TRIM54Q9BYV2 358 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 UNKQ9C0B0 810 aaKnown RBP8.6□□□□□ -1.03
HDAC3-212ENST00000492407 GRPEL1Q9HAV7 217 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 KCNK13Q9HB14 408 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 LZTFL1Q9NQ48 299 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 FBXO6Q9NRD1 293 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-212ENST00000492407 TRMT6Q9UJA5 497 aaKnown RBP8.6□□□□□ -1.03
HDAC3-212ENST00000492407 CORO1CQ9ULV4 474 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-212ENST00000492407 PDE10AQ9Y233 779 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 NEU2Q9Y3R4 380 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 SNRNP200O75643 2136 aaKnown RBP8.6□□□□□ -1.03
HDAC3-212ENST00000492407 DOCK10Q96BY6 2186 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 OTOGQ6ZRI0 2925 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 SYNDIG1LA6NDD5 238 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 URADA6NGE7 173 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 HAUS5O94927 633 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 SP1P08047 785 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 ENO2P09104 434 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 ESRRAP11474 423 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 COX6B1P14854 86 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 PGAM1P18669 254 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 CAPN3P20807 821 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 COILP38432 576 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 CCR8P51685 355 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 ALDH6A1Q02252 535 aaKnown RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 ILF2Q12905 390 aaKnown RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 USP10Q14694 798 aaKnown RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 OR1C1Q15619 314 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 ZXDCQ2QGD7 858 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 BBS9Q3SYG4 887 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 SFT2D3Q587I9 215 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 ANKRD22Q5VYY1 191 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 SLC25A25Q6KCM7 469 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 PAPD4Q6PIY7 484 aaKnown RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 LANCL3Q6ZV70 420 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 PIWIL4Q7Z3Z4 852 aaKnown RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 SLC26A11Q86WA9 606 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 SPPL2CQ8IUH8 684 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 CRLF3Q8IUI8 442 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 CNTN4Q8IWV2 1026 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 PPIL6Q8IXY8 311 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 PEX5LQ8IYB4 626 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 CPNE9Q8IYJ1 553 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 NAT8LQ8N9F0 302 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 POGLUT1Q8NBL1 392 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 C2CD4AQ8NCU7 369 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 OR56A3Q8NH54 315 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 NT5CQ8TCD5 201 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 ELP5Q8TE02 316 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 GRK7Q8WTQ7 553 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 EEF1AKMT1Q8WVE0 214 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 ANKRD7Q92527 254 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 TBC1D20Q96BZ9 403 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 PDLIM5Q96HC4 596 aaKnown RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 MAGED4Q96JG8 741 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 PHF12Q96QT6 1004 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 GPAMQ9HCL2 828 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 LANCL2Q9NS86 450 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 TRMT1Q9NXH9 659 aaKnown RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 TSR3Q9UJK0 312 aaKnown RBP8.59□□□□□ -1.03
HDAC3-212ENST00000492407 NAALAD2Q9Y3Q0 740 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 MAD1L1Q9Y6D9 718 aa8.59□□□□□ -1.03
HDAC3-212ENST00000492407 CACNA1DQ01668 2161 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 TRBC2A0A5B9 178 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 SGK494L7N484 410 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 ASNA1O43681 348 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 LCMT2O60294 686 aaKnown RBP8.58□□□□□ -1.04
HDAC3-212ENST00000492407 GALR3O60755 368 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-212ENST00000492407 CLDN14O95500 239 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 F10P00742 488 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 FHP07954 510 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 ZNF16P17020 682 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-212ENST00000492407 ALOX12P18054 663 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 IL1RNP18510 177 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 SSTR2P30874 369 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 TRHRP34981 398 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-212ENST00000492407 AHRP35869 848 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 FNTAP49354 379 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 OR4D2P58180 307 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 SLC26A5P58743 744 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms