RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 NUDT4Q9NZJ9 180 aa23.31■■□□□ 1.32
UPF3A-209ENST00000492270 LOC102723996A0A087X1L8 192 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 SUPT3HB4E1H0 165 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 CCNT2O60583 730 aaKnown RBP23.3■■□□□ 1.32
UPF3A-209ENST00000492270 KERAO60938 352 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 SUPT3HO75486 399 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 ALDOAP04075 364 aaKnown RBP23.3■■□□□ 1.32
UPF3A-209ENST00000492270 C8orf89P0DMQ9 161 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 EPORP19235 508 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 GLRBP48167 497 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 TOR1AIP1Q5JTV8 583 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 ADNP2Q6IQ32 1131 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 IGFL3Q6UXB1 125 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 TRPV3Q8NET8 790 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 PNPLA2Q96AD5 504 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 TSPYL1Q9H0U9 437 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 GPRC5BQ9NZH0 403 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 NFU1Q9UMS0 254 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 CSAG2Q9Y5P2 127 aa23.3■■□□□ 1.32
UPF3A-209ENST00000492270 FLNCQ14315 2725 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 RELNP78509 3460 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 A0A087X1B8 175 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 IGHV3-20A0A0C4DH32 117 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 KLHL41O60662 606 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 CDC123O75794 336 aaPredicted RBP23.29■■□□□ 1.32
UPF3A-209ENST00000492270 AGTR2P50052 363 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 PDK4Q16654 411 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 PLEKHN1Q494U1 663 aaPredicted RBP23.29■■□□□ 1.32
UPF3A-209ENST00000492270 IRAK1BP1Q5VVH5 260 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 TMIGD1Q6UXZ0 262 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 ABHD13Q7L211 337 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 LRRN4CLQ8ND94 238 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 SLC44A1Q8WWI5 657 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 PAFAH2Q99487 392 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 CD244Q9BZW8 370 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 ZNF700Q9H0M5 742 aa23.29■■□□□ 1.32
UPF3A-209ENST00000492270 CNTRLQ7Z7A1 2325 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 A0A096LPK6 155 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 CLGNO14967 610 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 CHST10O43529 356 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 H2AFYO75367 372 aaKnown RBP23.28■■□□□ 1.32
UPF3A-209ENST00000492270 SERPINA6P08185 405 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 PRR35P0CG20 571 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 SMIM10L1P0DMW3 83 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 CD22P20273 847 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 SERPINB8P50452 374 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 DOC2AQ14183 400 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 AGAP7PQ5VUJ5 663 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 KBTBD2Q8IY47 623 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 CPT1CQ8TCG5 803 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 METTL21AQ8WXB1 218 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 SMIM10Q96HG1 83 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 AGAP4Q96P64 663 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 CAPS2Q9BXY5 557 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 SLAMF7Q9NQ25 335 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 LANCL2Q9NS86 450 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 RIC8BQ9NVN3 520 aa23.28■■□□□ 1.32
UPF3A-209ENST00000492270 PCDH17O14917 1159 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 RHOXF2BP0C7M4 288 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 MTHFD2P13995 350 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 TYK2P29597 1187 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 HNRNPH1P31943 449 aaKnown RBP23.27■■□□□ 1.32
UPF3A-209ENST00000492270 RHAGQ02094 409 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 XKR6Q5GH73 641 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 LINC00696Q6ZRV3 163 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 LRRC70Q7Z2Q7 622 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 VN1R5Q7Z5H4 357 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 KRT78Q8N1N4 520 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 ZADH2Q8N4Q0 377 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 CCT6BQ92526 530 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 PSMF1Q92530 271 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 TM9SF4Q92544 642 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 RHOXF2Q9BQY4 288 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 COPG2Q9UBF2 871 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 B3GNT3Q9Y2A9 372 aa23.27■■□□□ 1.32
UPF3A-209ENST00000492270 A0A0G2JN53 185 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 POC1B-GALNT4F8VUJ3 575 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 SEC24DO94855 1032 aaPredicted RBP23.26■■□□□ 1.31
UPF3A-209ENST00000492270 TBX6O95947 436 aaPredicted RBP23.26■■□□□ 1.31
UPF3A-209ENST00000492270 INHBAP08476 426 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 FAM83EQ2M2I3 478 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 IGFL2Q6UWQ7 119 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 ANKRD37Q7Z713 158 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 SIRT6Q8N6T7 355 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 BRIX1Q8TDN6 353 aaKnown RBP23.26■■□□□ 1.31
UPF3A-209ENST00000492270 UBTD2Q8WUN7 234 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 TSLPQ969D9 159 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 WDR34Q96EX3 536 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 PTCD3Q96EY7 689 aaKnown RBP23.26■■□□□ 1.31
UPF3A-209ENST00000492270 IMMP1LQ96LU5 166 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 GPR78Q96P69 363 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 OR1F2PQ96R84 312 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 VPS11Q9H270 941 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 EHD1Q9H4M9 534 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 NT5DC2Q9H857 520 aa23.26■■□□□ 1.31
UPF3A-209ENST00000492270 ZNF490Q9ULM2 529 aaPredicted RBP23.26■■□□□ 1.31
UPF3A-209ENST00000492270 URADA6NGE7 173 aa23.25■■□□□ 1.31
UPF3A-209ENST00000492270 KLHL2O95198 593 aa23.25■■□□□ 1.31
UPF3A-209ENST00000492270 SERPINA7P05543 415 aa23.25■■□□□ 1.31
UPF3A-209ENST00000492270 FHP07954 510 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms