RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 CRABP2P29373 138 aa25.57■■□□□ 1.68
SH3GL3-204ENST00000492099 SRSF1Q07955 248 aaKnown RBP eCLIP25.57■■□□□ 1.68
SH3GL3-204ENST00000492099 LANCL3Q6ZV70 420 aa25.57■■□□□ 1.68
SH3GL3-204ENST00000492099 RAPH1Q70E73 1250 aa25.57■■□□□ 1.68
SH3GL3-204ENST00000492099 KRT78Q8N1N4 520 aa25.57■■□□□ 1.68
SH3GL3-204ENST00000492099 SIRT6Q8N6T7 355 aa25.57■■□□□ 1.68
SH3GL3-204ENST00000492099 PLPP5Q8NEB5 264 aa25.57■■□□□ 1.68
SH3GL3-204ENST00000492099 OR5T3Q8NGG3 340 aa25.57■■□□□ 1.68
SH3GL3-204ENST00000492099 PITHD1Q9GZP4 211 aaPredicted RBP25.57■■□□□ 1.68
SH3GL3-204ENST00000492099 SCN3AQ9NY46 2000 aa25.57■■□□□ 1.68
SH3GL3-204ENST00000492099 CNTRLQ7Z7A1 2325 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 TAPBPO15533 448 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 CHST10O43529 356 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 JAK1P23458 1154 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 GSTM2P28161 218 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 TSFMP43897 325 aaKnown RBP25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 SLMAPQ14BN4 828 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 OR4D1Q15615 310 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 FHL5Q5TD97 284 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 CEP128Q6ZU80 1094 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 ANKRD37Q7Z713 158 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 STAG3L4Q8TBR4 150 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 CREB3L4Q8TEY5 395 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 ZNF592Q92610 1267 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 TBC1D20Q96BZ9 403 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 SEC16BQ96JE7 1060 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 TMEM79Q9BSE2 394 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 AGPAT4Q9NRZ5 378 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 LANCL2Q9NS86 450 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 DNAJC11Q9NVH1 559 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 CD274Q9NZQ7 290 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 RNF112Q9ULX5 631 aa25.56■■□□□ 1.68
SH3GL3-204ENST00000492099 OR2W5A6NFC9 320 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 STK16O75716 305 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 SEC24DO94855 1032 aaPredicted RBP25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 S100BP04271 92 aaPredicted RBP25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 FHP07954 510 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 CELA2AP08217 269 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 ITGAMP11215 1152 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 STXBP1P61764 594 aaKnown RBP25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 ARG2P78540 354 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 RHAGQ02094 409 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 HYAL2Q12891 473 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 NSDHLQ15738 373 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 PLAG1Q6DJT9 500 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 TMIGD1Q6UXZ0 262 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 TBC1D1Q86TI0 1168 aaPredicted RBP25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 MMGT1Q8N4V1 131 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 PDPRQ8NCN5 879 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 HAS2Q92819 552 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 BARD1Q99728 777 aaKnown RBP25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 EHD1Q9H4M9 534 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 NT5DC2Q9H857 520 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 NMRAL1Q9HBL8 299 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 COPG2Q9UBF2 871 aa25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 PTBP2Q9UKA9 531 aaKnown RBP25.55■■□□□ 1.68
SH3GL3-204ENST00000492099 HECTD1Q9ULT8 2610 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 LRRK2Q5S007 2527 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 IGHV3-20A0A0C4DH32 117 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 CTAGE15A4D2H0 777 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 MAGEB17A8MXT2 336 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 CLGNO14967 610 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 CDC123O75794 336 aaPredicted RBP25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 TUBB4AP04350 444 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 SLC35E2BP0CK96 405 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 SMIM10L1P0DMW3 83 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 HNF4AP41235 474 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 HSPA7P48741 367 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 RAB8AP61006 207 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 SLBPQ14493 270 aaKnown RBP eCLIP25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 ABRAXAS2Q15018 415 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 CCDC91Q7Z6B0 441 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 CMC1Q7Z7K0 106 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 CTAGE6Q86UF2 777 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 MNS1Q8NEH6 495 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 SMIM10Q96HG1 83 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 RBCK1Q9BYM8 510 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 MTRF1LQ9UGC7 380 aaKnown RBP25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 TEKT2Q9UIF3 430 aa25.54■■□□□ 1.68
SH3GL3-204ENST00000492099 B3GALT4O96024 378 aa25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 LTA4HP09960 611 aaKnown RBP25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 PHBP35232 272 aa25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 OLR1P78380 273 aa25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 ACTN3Q08043 901 aaPredicted RBP25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 EFTUD2Q15029 972 aaKnown RBP eCLIP25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 EXT1Q16394 746 aa25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 BTBD16Q32M84 506 aa25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 TOR1AIP1Q5JTV8 583 aa25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 ISCA2Q86U28 154 aa25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 CATSPER1Q8NEC5 780 aa25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 TSPYL1Q9H0U9 437 aa25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 KLHL31Q9H511 634 aa25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 ALG9Q9H6U8 611 aa25.53■■□□□ 1.68
SH3GL3-204ENST00000492099 DNAJB6O75190 326 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 CBX6O95503 412 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 TFEBP19484 476 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 HPDP32754 393 aaPredicted RBP25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 MRPL49Q13405 166 aaKnown RBP25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 NR6A1Q15406 480 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms