RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 TFEBP19484 476 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 GMPRP36959 345 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 MAGEA12P43365 314 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 GLRBP48167 497 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 CCT5P48643 541 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 MRPL49Q13405 166 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 FAM53BQ14153 422 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 TSNQ15631 228 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 PPP1R3AQ16821 1122 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 TMEM214Q6NUQ4 689 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 PDSS2Q86YH6 399 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 GPSM1Q86YR5 675 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 FAM26EQ8N5C1 309 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 CISD2Q8N5K1 135 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 EFCAB3Q8N7B9 438 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 KCT2Q8NC54 265 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 ABHD11Q8NFV4 315 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 OR56A3Q8NH54 315 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 ANKRD7Q92527 254 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 EXT2Q93063 718 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 MOCOSQ96EN8 888 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 UBXN10Q96LJ8 280 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 PSMG3-AS1Q96PY0 264 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 SMC6Q96SB8 1091 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 EGFL8Q99944 293 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 ALG9Q9H6U8 611 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 VIPAS39Q9H9C1 493 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 ZNF160Q9HCG1 818 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 ASF1BQ9NVP2 202 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 UTP6Q9NYH9 597 aaKnown RBP12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 SENP1Q9P0U3 644 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 RNF112Q9ULX5 631 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 PCDHGA10Q9Y5H3 936 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 POLEQ07864 2286 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 ICE1Q9Y2F5 2266 aa12.02□□□□□ -0.49
SEC61A1-206ENST00000491668 SCN3AQ9NY46 2000 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 OR2W5A6NFC9 320 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 FOXO6A8MYZ6 492 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 COPEO14579 308 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 SEMA7AO75326 666 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 VPS4BO75351 444 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 IPO13O94829 963 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 GUCA1CO95843 209 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 CELA2AP08217 269 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 ENO2P09104 434 aaPredicted RBP12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 HRH2P25021 359 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 EMP2P54851 167 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 RPS15AP62244 130 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 MEF2AQ02078 507 aaPredicted RBP12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 ACAP2Q15057 778 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 FAAH2Q6GMR7 532 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 TMEM205Q6UW68 189 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 LCTLQ6UWM7 567 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 TRABD2AQ86V40 505 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 C17orf64Q86WR6 236 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 CENPLQ8N0S6 344 aaPredicted RBP12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 C4orf33Q8N1A6 199 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 ZNF740Q8NDX6 193 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 OR4K1Q8NGD4 311 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 STAG3L4Q8TBR4 150 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 MZB1Q8WU39 189 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 ALKBH8Q96BT7 664 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 THOC3Q96J01 351 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 LHPPQ9H008 270 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 PCBD2Q9H0N5 130 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 SPNS1Q9H2V7 528 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 MKKSQ9NPJ1 570 aaPredicted RBP12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 IGSF5Q9NSI5 407 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 ARL15Q9NXU5 204 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 CD274Q9NZQ7 290 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 DCDC2Q9UHG0 476 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 VPS4AQ9UN37 437 aa12.01□□□□□ -0.49
SEC61A1-206ENST00000491668 CRYBG3Q68DQ2 2970 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 CELSR2Q9HCU4 2923 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 LOC102723996A0A087X1L8 192 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 IGHV1-45A0A0A0MS14 117 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 NCF1BA6NI72 391 aaPredicted RBP12□□□□□ -0.49
SEC61A1-206ENST00000491668 SYCE1LA8MT33 242 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 NCF1CA8MVU1 366 aaPredicted RBP12□□□□□ -0.49
SEC61A1-206ENST00000491668 SUPT3HB4E1H0 165 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 TXNDC9O14530 226 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 MAP2K7O14733 419 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 DNAJB6O75190 326 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 GLRA3O75311 464 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 SUPT3HO75486 399 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 WISP3O95389 354 aaPredicted RBP12□□□□□ -0.49
SEC61A1-206ENST00000491668 BMP10O95393 424 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 NSA2O95478 260 aaKnown RBP12□□□□□ -0.49
SEC61A1-206ENST00000491668 CBX6O95503 412 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 GSTA1P08263 222 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 RBP1P09455 135 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 NCF1P14598 390 aaPredicted RBP12□□□□□ -0.49
SEC61A1-206ENST00000491668 IL1RNP18510 177 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 SOX11P35716 441 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 AP1S2P56377 157 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 EEF1A2Q05639 463 aaKnown RBP12□□□□□ -0.49
SEC61A1-206ENST00000491668 DLG1Q12959 904 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 PCOLCEQ15113 449 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 CATSPEREQ5SY80 951 aa12□□□□□ -0.49
SEC61A1-206ENST00000491668 AGAP7PQ5VUJ5 663 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms