RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 NCKAP5O14513 1909 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 GOLGA6L10A0A0M3HER8 536 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 C19orf84I3L1E1 186 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 TAPBPO15533 448 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 PRPF4O43172 522 aaKnown RBP eCLIP8.36□□□□□ -1.07
HDAC3-211ENST00000491581 PRKNO60260 465 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-211ENST00000491581 PRAMEF2O60811 474 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 SEC31AO94979 1220 aaKnown RBP8.36□□□□□ -1.07
HDAC3-211ENST00000491581 RASAL1O95294 804 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 STSP08842 583 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 ZNF37AP17032 561 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-211ENST00000491581 TPP2P29144 1249 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-211ENST00000491581 SCTRP47872 440 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 CCR8P51685 355 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 OR4D2P58180 307 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 SLC26A5P58743 744 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 ADORA2A-AS1P86434 159 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 REEP5Q00765 189 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 RELAQ04206 551 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 SP140Q13342 867 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 RUNX2Q13950 521 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 USP10Q14694 798 aaKnown RBP8.36□□□□□ -1.07
HDAC3-211ENST00000491581 RBBP5Q15291 538 aaKnown RBP8.36□□□□□ -1.07
HDAC3-211ENST00000491581 OR4D1Q15615 310 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 ZRSR2Q15696 482 aaKnown RBP8.36□□□□□ -1.07
HDAC3-211ENST00000491581 C3AR1Q16581 482 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 ZNF766Q5HY98 468 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 DUPD1Q68J44 220 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 PLAG1Q6DJT9 500 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 FAM45BPQ6NSW5 357 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 FGD2Q7Z6J4 655 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-211ENST00000491581 CLNKQ7Z7G1 428 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 AFAP1L2Q8N4X5 818 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 BCORP1Q8N888 145 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 CAMKVQ8NCB2 501 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 MDS2Q8NDY4 140 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 ABHD11Q8NFV4 315 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 FAM45AQ8TCE6 357 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 CREB3L4Q8TEY5 395 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 SLC5A11Q8WWX8 675 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 SLCO2A1Q92959 643 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 EXT2Q93063 718 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 FBXL8Q96CD0 374 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 CCDC120Q96HB5 630 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 TMEM79Q9BSE2 394 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 MCMBPQ9BTE3 642 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 TUBB6Q9BUF5 446 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 ZNF223Q9UK11 482 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-211ENST00000491581 BOLA1Q9Y3E2 137 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 CELSR2Q9HCU4 2923 aa8.36□□□□□ -1.07
HDAC3-211ENST00000491581 TRAV17A0A0B4J275 112 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 TRBC2A0A5B9 178 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 GABRR3A8MPY1 467 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 EFCAB8A8MWE9 144 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 PRSS44E7EML9 344 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 NPIPA5E9PKD4 350 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 CCL21O00585 134 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 SLC16A5O15375 505 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 NEURL1O76050 574 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 WDR47O94967 919 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 WISP3O95389 354 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 C1QAP02745 245 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 FHP07954 510 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 HIST1H2AGP0C0S8 130 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 SLC35G6P0C7Q6 338 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 SMIM10L1P0DMW3 83 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 ALOX12P18054 663 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 EPORP19235 508 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 CD22P20273 847 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 HIST1H2ADP20671 130 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 KCNC1P48547 511 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 BTN3A2P78410 334 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 OC90Q02509 493 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 ACTN3Q08043 901 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 DLG1Q12959 904 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 CSHL1Q14406 222 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 NAA25Q14CX7 972 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 MORF4L2Q15014 288 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 OR1C1Q15619 314 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 SP5Q6BEB4 398 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 H3F3CQ6NXT2 135 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 RPUSD3Q6P087 351 aaKnown RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 NXPE4Q6UWF7 544 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 GALNTL5Q7Z4T8 443 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 CHERPQ8IWX8 916 aaKnown RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 PALM2Q8IXS6 379 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 LMNTD2Q8IXW0 634 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 ZBED8Q8IZ13 594 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 PDIK1LQ8N165 341 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 CA13Q8N1Q1 262 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 CPSF7Q8N684 471 aaKnown RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 ZNF321PQ8N8H1 164 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 FAM47BQ8NA70 645 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 NFAM1Q8NET5 270 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 NT5CQ8TCD5 201 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 ITLN2Q8WWU7 325 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 TBC1D20Q96BZ9 403 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 SMIM10Q96HG1 83 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 VPS39Q96JC1 886 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms