RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 SLC6A16Q9GZN6 736 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 USP9XQ93008 2570 aaPredicted RBP29.58■■■□□ 2.33
LDB1-204ENST00000490751 ESYT3A0FGR9 886 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 FAM155BO75949 473 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 GNAZP19086 355 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 STX2P32856 288 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 HNF4AP41235 474 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 AGTR2P50052 363 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 RAB10P61026 200 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 ATP6V0D1P61421 351 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 NIPAL1Q6NVV3 410 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 C8orf74Q6P047 294 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 GPSM1Q86YR5 675 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 FBF1Q8TES7 1133 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 BARD1Q99728 777 aaKnown RBP29.57■■■□□ 2.32
LDB1-204ENST00000490751 TMEM79Q9BSE2 394 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 AGPAT4Q9NRZ5 378 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 LANCL2Q9NS86 450 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 PLA2G3Q9NZ20 509 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 WWOXQ9NZC7 414 aa29.57■■■□□ 2.32
LDB1-204ENST00000490751 DYTNA2CJ06 578 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 DNAJB6O75190 326 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 CBX6O95503 412 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 C1GALT1C1LP0DN25 315 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 RAB8AP61006 207 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 RHAGQ02094 409 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 HYAL2Q12891 473 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 OR4D1Q15615 310 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 SLCO4C1Q6ZQN7 724 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 TCAIMQ8N3R3 496 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 PRR7Q8TB68 274 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 TBC1D20Q96BZ9 403 aa29.56■■■□□ 2.32
LDB1-204ENST00000490751 BLACEA4D250 179 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 URADA6NGE7 173 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 TAPBPO15533 448 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 CHST10O43529 356 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 FHP07954 510 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 SLMAPQ14BN4 828 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 ABRAXAS2Q15018 415 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 EFTUD2Q15029 972 aaKnown RBP eCLIP29.55■■■□□ 2.323e-10■■■■□ 23.5
LDB1-204ENST00000490751 BTBD16Q32M84 506 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 PLPP5Q8NEB5 264 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 CREB3L4Q8TEY5 395 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 UBXN10Q96LJ8 280 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 KLHL31Q9H511 634 aa29.55■■■□□ 2.32
LDB1-204ENST00000490751 SEMA7AO75326 666 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 H2AFYO75367 372 aaKnown RBP29.54■■■□□ 2.32
LDB1-204ENST00000490751 URI1O94763 535 aaPredicted RBP29.54■■■□□ 2.32
LDB1-204ENST00000490751 SERPINA6P08185 405 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 GMPRP36959 345 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 SLBPQ14493 270 aaKnown RBP eCLIP29.54■■■□□ 2.32
LDB1-204ENST00000490751 NSDHLQ15738 373 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 FBXO48Q5FWF7 155 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 TOR1AIP1Q5JTV8 583 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 CDKL4Q5MAI5 379 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 PLAG1Q6DJT9 500 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 CMC1Q7Z7K0 106 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP29.54■■■□□ 2.322e-6■■□□□ 13.2
LDB1-204ENST00000490751 OR1N1Q8NGS0 311 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 TSLPQ969D9 159 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 LRRC1Q9BTT6 524 aa29.54■■■□□ 2.32
LDB1-204ENST00000490751 CNOT10Q9H9A5 744 aaKnown RBP29.54■■■□□ 2.32
LDB1-204ENST00000490751 ANKUB1A6NFN9 424 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 CYSRT1A8MQ03 144 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 MAGEB17A8MXT2 336 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 F10P00742 488 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 JAK1P23458 1154 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 GGT5P36269 586 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 HSPA7P48741 367 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 GUCY2DQ02846 1103 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 NAB1Q13506 487 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 SFT2D3Q587I9 215 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 SULT1C3Q6IMI6 304 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 RAPH1Q70E73 1250 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 GRHL3Q8TE85 626 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 HAS2Q92819 552 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 KIAA1191Q96A73 305 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 ESAMQ96AP7 390 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 CAPS2Q9BXY5 557 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 AICDAQ9GZX7 198 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 DNAJC11Q9NVH1 559 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 GPRC5BQ9NZH0 403 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 CD274Q9NZQ7 290 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 RNF112Q9ULX5 631 aa29.53■■■□□ 2.32
LDB1-204ENST00000490751 C4orf51C9J302 202 aa29.52■■■□□ 2.32
LDB1-204ENST00000490751 SMIM10L1P0DMW3 83 aa29.52■■■□□ 2.32
LDB1-204ENST00000490751 TNFSF10P50591 281 aa29.52■■■□□ 2.32
LDB1-204ENST00000490751 ABHD17BQ5VST6 288 aa29.52■■■□□ 2.32
LDB1-204ENST00000490751 PAPD4Q6PIY7 484 aaKnown RBP29.52■■■□□ 2.32
LDB1-204ENST00000490751 TMIGD1Q6UXZ0 262 aa29.52■■■□□ 2.32
LDB1-204ENST00000490751 PDPRQ8NCN5 879 aa29.52■■■□□ 2.32
LDB1-204ENST00000490751 EXT2Q93063 718 aa29.52■■■□□ 2.32
LDB1-204ENST00000490751 SMIM10Q96HG1 83 aa29.52■■■□□ 2.32
LDB1-204ENST00000490751 PSMG3-AS1Q96PY0 264 aa29.52■■■□□ 2.32
LDB1-204ENST00000490751 ZDHHC18Q9NUE0 388 aa29.52■■■□□ 2.32
LDB1-204ENST00000490751 TRAV17A0A0B4J275 112 aa29.51■■■□□ 2.31
LDB1-204ENST00000490751 B4GALT2O60909 372 aa29.51■■■□□ 2.31
LDB1-204ENST00000490751 WDPCPO95876 746 aa29.51■■■□□ 2.31
LDB1-204ENST00000490751 SLC35E2BP0CK96 405 aa29.51■■■□□ 2.31
LDB1-204ENST00000490751 ZNF33BQ06732 778 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms