RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 ABHD11Q8NFV4 315 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 ATL1Q8WXF7 558 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 PPANQ9NQ55 473 aaKnown RBP16.7■□□□□ 0.26
YIPF3-208ENST00000490447 PPP2R2CQ9Y2T4 447 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 NEU2Q9Y3R4 380 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 TRBC2A0A5B9 178 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 URADA6NGE7 173 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 MAN1A2O60476 641 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 B4GALT2O60909 372 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 SLC25A12O75746 678 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 WISP2O76076 250 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 ZNF24P17028 368 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 FNTAP49354 379 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 OLR1P78380 273 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 TIAL1Q01085 375 aaKnown RBP eCLIP16.7■□□□□ 0.26
YIPF3-208ENST00000490447 SPANXN3Q5MJ09 141 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 RBM20Q5T481 1227 aaKnown RBP16.7■□□□□ 0.26
YIPF3-208ENST00000490447 Q6ZPB1 254 aaPredicted RBP16.7■□□□□ 0.26
YIPF3-208ENST00000490447 KIAA0408Q6ZU52 694 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.7■□□□□ 0.26
YIPF3-208ENST00000490447 RPS19BP1Q86WX3 136 aaKnown RBP16.7■□□□□ 0.26
YIPF3-208ENST00000490447 CYP4X1Q8N118 509 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 GHDCQ8N2G8 530 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 AFAP1L2Q8N4X5 818 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 TMEM125Q96AQ2 219 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 PTCHD1Q96NR3 888 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 SARGQ9BW04 601 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 ZNF835Q9Y2P0 537 aa16.7■□□□□ 0.26
YIPF3-208ENST00000490447 PSMD12O00232 456 aaPredicted RBP16.69■□□□□ 0.26
YIPF3-208ENST00000490447 CHST10O43529 356 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 ASNA1O43681 348 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 PRMT3O60678 531 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 NEURL1O76050 574 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 CLDN14O95500 239 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 GUCA1CO95843 209 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 ZNF888P0CJ79 500 aaPredicted RBP16.69■□□□□ 0.26
YIPF3-208ENST00000490447 CYB561P49447 251 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 STRA8Q7Z7C7 330 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 CNTN4Q8IWV2 1026 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 EID3Q8N140 333 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 GPATCH11Q8N954 259 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 OR4K1Q8NGD4 311 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 OR56A3Q8NH54 315 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 ELP5Q8TE02 316 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 SLC5A11Q8WWX8 675 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 LURAP1Q96LR2 239 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 NAT9Q9BTE0 207 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 ASIC3Q9UHC3 531 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 ZFP69BQ9UJL9 534 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 MEMO1Q9Y316 297 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 DYRK1BQ9Y463 629 aa16.69■□□□□ 0.26
YIPF3-208ENST00000490447 FCHO1O14526 889 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 PRRG2O14669 202 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 TSPAN12O95859 305 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 AHSGP02765 367 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 ENO2P09104 434 aaPredicted RBP16.68■□□□□ 0.26
YIPF3-208ENST00000490447 TPP2P29144 1249 aaPredicted RBP16.68■□□□□ 0.26
YIPF3-208ENST00000490447 CATSPEREQ5SY80 951 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 RNASEH2BQ5TBB1 312 aaKnown RBP16.68■□□□□ 0.26
YIPF3-208ENST00000490447 QSOX2Q6ZRP7 698 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 KIF2BQ8N4N8 673 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 ARMC2Q8NEN0 867 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 NT5CQ8TCD5 201 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 FBXL8Q96CD0 374 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 MTFMTQ96DP5 389 aaKnown RBP16.68■□□□□ 0.26
YIPF3-208ENST00000490447 CERS2Q96G23 380 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 TSNARE1Q96NA8 513 aa16.68■□□□□ 0.26
YIPF3-208ENST00000490447 SCN2AQ99250 2005 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 SAGE2PA6NJ88 616 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 NME2P1O60361 137 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 BANF1O75531 89 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 B3GALT4O96024 378 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 NME2P22392 152 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 GABRB3P28472 473 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 AHRP35869 848 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 SCTRP47872 440 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 CCZ1BP86790 482 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 CCZ1P86791 482 aaPredicted RBP16.67■□□□□ 0.26
YIPF3-208ENST00000490447 HECTD2Q5U5R9 776 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 FAM45BPQ6NSW5 357 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 GALNT7Q86SF2 657 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 SIAH3Q8IW03 269 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 CPSF7Q8N684 471 aaKnown RBP16.67■□□□□ 0.26
YIPF3-208ENST00000490447 TRPV3Q8NET8 790 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 FAM45AQ8TCE6 357 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 ADAMTS18Q8TE60 1221 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 AGAP11Q8TF27 550 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 NEIL2Q969S2 332 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 OR4K3Q96R72 315 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 OLFM1Q99784 485 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 TRIM51Q9BSJ1 452 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 TRIM8Q9BZR9 551 aa16.67■□□□□ 0.26
YIPF3-208ENST00000490447 CLK4Q9HAZ1 481 aaKnown RBP16.67■□□□□ 0.26
YIPF3-208ENST00000490447 CORO1CQ9ULV4 474 aaPredicted RBP16.67■□□□□ 0.26
YIPF3-208ENST00000490447 SCN3AQ9NY46 2000 aa16.66■□□□□ 0.26
YIPF3-208ENST00000490447 TEP1Q99973 2627 aaKnown RBP16.66■□□□□ 0.26
YIPF3-208ENST00000490447 DNALI1O14645 258 aaPredicted RBP16.66■□□□□ 0.26
YIPF3-208ENST00000490447 RNH1P13489 461 aaKnown RBP16.66■□□□□ 0.26
YIPF3-208ENST00000490447 POU3F2P20265 443 aaPredicted RBP16.66■□□□□ 0.26
YIPF3-208ENST00000490447 MAOAP21397 527 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms