RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 KIF2BQ8N4N8 673 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 AFAP1L2Q8N4X5 818 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 ASB11Q8WXH4 323 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 ATG4AQ8WYN0 398 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 TSLPQ969D9 159 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 SEC16BQ96JE7 1060 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 SARGQ9BW04 601 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 KIFC1Q9BW19 673 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 UCK2Q9BZX2 261 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 LACRTQ9GZZ8 138 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 PAK5Q9P286 719 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 AMFRQ9UKV5 643 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 NAALAD2Q9Y3Q0 740 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 AKAP6Q13023 2319 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 FEZF1A0PJY2 475 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 SAGE2PA6NJ88 616 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 USP27XA6NNY8 438 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 FCHO1O14526 889 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 HS6ST1O60243 411 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 CTAG2O75638 210 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 ZWINTO95229 277 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 VAPBO95292 243 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 IFNB1P01574 187 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 STATHP02808 62 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 FHP07954 510 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 SLC35G6P0C7Q6 338 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 ENO3P13929 434 aaPredicted RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 JAK1P23458 1154 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 NAP1L1P55209 391 aaKnown RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 NUP107P57740 925 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 SESN2P58004 480 aaPredicted RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 PPP2R2AP63151 447 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 CRADDP78560 199 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 MYBPHQ13203 477 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 HERC3Q15034 1050 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 TTLL9Q3SXZ7 439 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 THEMIS2Q5TEJ8 643 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 ARMC3Q5W041 872 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 KIAA0930Q6ICG6 404 aaPredicted RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 NIPAL1Q6NVV3 410 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 QSOX2Q6ZRP7 698 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 KIAA0408Q6ZU52 694 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 PEX26Q7Z412 305 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 ASPGQ86U10 573 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 SLC26A11Q86WA9 606 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 CCDC71Q8IV32 467 aaPredicted RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 SULF2Q8IWU5 870 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 RPRMLQ8N4K4 120 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 KCT2Q8NC54 265 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 NFAM1Q8NET5 270 aaPredicted RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 MYRIPQ8NFW9 859 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 GIMAP7Q8NHV1 300 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 ZCCHC10Q8TBK6 192 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 NRGNQ92686 78 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 KCNJ9Q92806 393 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 TBC1D20Q96BZ9 403 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 FAM136AQ96C01 138 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 MFSD3Q96ES6 412 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 PEX11GQ96HA9 241 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 ALPK1Q96QP1 1244 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 SLC30A3Q99726 388 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 MACROD1Q9BQ69 325 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 PCBD2Q9H0N5 130 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 CCDC177Q9NQR7 707 aaPredicted RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 CCM2LQ9NUG4 571 aaPredicted RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 INTS10Q9NVR2 710 aaKnown RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 ZNF358Q9NW07 568 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 BFARQ9NZS9 450 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 ST6GALNAC2Q9UJ37 374 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 DRG1Q9Y295 367 aaKnown RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 RPH3AQ9Y2J0 694 aaPredicted RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 CRYL1Q9Y2S2 319 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 MED16Q9Y2X0 877 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 REXO2Q9Y3B8 237 aaKnown RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 L3MBTL1Q9Y468 752 aa7.66□□□□□ -1.18
USP39-216ENST00000490193 EPN1Q9Y6I3 576 aaPredicted RBP7.66□□□□□ -1.18
USP39-216ENST00000490193 IGKV3D-11A0A0A0MRZ8 115 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 FAM237BA0A1B0GVD1 139 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 TCRBV16S1A1N1A0A5B0 115 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 TMEM200CA6NKL6 621 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 E5RI56 91 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 EIF3FO00303 357 aaPredicted RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 SIAH2O43255 324 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 ZBTB14O43829 449 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 PEX1O43933 1283 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 LCMT2O60294 686 aaKnown RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 CDC40O60508 579 aaKnown RBP eCLIP7.65□□□□□ -1.18
USP39-216ENST00000490193 GALR3O60755 368 aaPredicted RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 CDC123O75794 336 aaPredicted RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 DRD2P14416 443 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 COILP38432 576 aaPredicted RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 TBPL1P62380 186 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 SKP1P63208 163 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 PMPCAQ10713 525 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 FOXD4Q12950 439 aaPredicted RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 ARHGAP21Q5T5U3 1957 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 CAPN13Q6MZZ7 669 aaPredicted RBP7.65□□□□□ -1.18
USP39-216ENST00000490193 PAOXQ6QHF9 649 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 C4orf22Q6V702 233 aa7.65□□□□□ -1.18
USP39-216ENST00000490193 CYHR1Q6ZMK1 362 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms