RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 UAP1Q16222 522 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-217ENST00000489719 MROH9Q5TGP6 573 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 CCDC91Q7Z6B0 441 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 CMC1Q7Z7K0 106 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 PLPP5Q8NEB5 264 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 OR5T3Q8NGG3 340 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 KIF18AQ8NI77 898 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 BRIX1Q8TDN6 353 aaKnown RBP16.83■□□□□ 0.28
ABCF3-217ENST00000489719 CCT6BQ92526 530 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 EXT2Q93063 718 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 ESAMQ96AP7 390 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 TBC1D20Q96BZ9 403 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 SNRNP40Q96DI7 357 aaKnown RBP16.83■□□□□ 0.28
ABCF3-217ENST00000489719 C19orf60Q96EN9 201 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 CNDP1Q96KN2 507 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 SLC6A16Q9GZN6 736 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 PITHD1Q9GZP4 211 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-217ENST00000489719 ALG9Q9H6U8 611 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 NT5DC2Q9H857 520 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 PRM3Q9NNZ6 103 aa16.83■□□□□ 0.28
ABCF3-217ENST00000489719 PTBP2Q9UKA9 531 aaKnown RBP16.83■□□□□ 0.28
ABCF3-217ENST00000489719 ANKRD12Q6UB98 2062 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 TNRC6AQ8NDV7 1962 aaKnown RBP16.82■□□□□ 0.28
ABCF3-217ENST00000489719 IGHV3-20A0A0C4DH32 117 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 ANKDD1BA6NHY2 528 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 CCNT2O60583 730 aaKnown RBP16.82■□□□□ 0.28
ABCF3-217ENST00000489719 CDC123O75794 336 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-217ENST00000489719 SEC24DO94855 1032 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-217ENST00000489719 SLC35E2BP0CK96 405 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 TFEBP19484 476 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 GNLYP22749 145 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 JAK1P23458 1154 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 GSTM2P28161 218 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 KCNC1P48547 511 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 ARG2P78540 354 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 SLBPQ14493 270 aaKnown RBP eCLIP16.82■□□□□ 0.28
ABCF3-217ENST00000489719 EFTUD2Q15029 972 aaKnown RBP eCLIP16.82■□□□□ 0.287e-9■■■□□ 15.6
ABCF3-217ENST00000489719 TLR1Q15399 786 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 HIST2H2ACQ16777 129 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-217ENST00000489719 PRR30Q53SZ7 412 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-217ENST00000489719 FBXO48Q5FWF7 155 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 XKR6Q5GH73 641 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 TOR1AIP1Q5JTV8 583 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 HIST2H2AA3Q6FI13 130 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 ANKRD37Q7Z713 158 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 ISCA2Q86U28 154 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 CUZD1Q86UP6 607 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 SIRT6Q8N6T7 355 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 NOA1Q8NC60 698 aaKnown RBP16.82■□□□□ 0.28
ABCF3-217ENST00000489719 CREB3L4Q8TEY5 395 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 FAR2Q96K12 515 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 IMMP1LQ96LU5 166 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 KLHL31Q9H511 634 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 DMGDHQ9UI17 866 aaKnown RBP16.82■□□□□ 0.28
ABCF3-217ENST00000489719 TEKT2Q9UIF3 430 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 HEATR5BQ9P2D3 2071 aa16.82■□□□□ 0.28
ABCF3-217ENST00000489719 A0A087X1B8 175 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 A8MUI8 341 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 SUPT3HB4E1H0 165 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 PSMD12O00232 456 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-217ENST00000489719 B4GALT2O60909 372 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 DNAJB6O75190 326 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 SUPT3HO75486 399 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 B3GALT4O96024 378 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 FHP07954 510 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 SMIM10L1P0DMW3 83 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 HPDP32754 393 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-217ENST00000489719 EFNA3P52797 238 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 OLR1P78380 273 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 LAPTM5Q13571 262 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 ZNF169Q14929 603 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-217ENST00000489719 ABRAXAS2Q15018 415 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 PDK4Q16654 411 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 FAM83EQ2M2I3 478 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 BTBD16Q32M84 506 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 LANCL3Q6ZV70 420 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 RELL1Q8IUW5 271 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 SHISA5Q8N114 240 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 FAM26EQ8N5C1 309 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 PDPRQ8NCN5 879 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 PSMF1Q92530 271 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 NXNL1Q96CM4 212 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 TRIM44Q96DX7 344 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-217ENST00000489719 SMIM10Q96HG1 83 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 SEC16BQ96JE7 1060 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 TMEM79Q9BSE2 394 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 RBCK1Q9BYM8 510 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 CD244Q9BZW8 370 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 RHBGQ9H310 441 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 EHD1Q9H4M9 534 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 AGPAT4Q9NRZ5 378 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 ASF1BQ9NVP2 202 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 STMN3Q9NZ72 180 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 NINJ2Q9NZG7 142 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 NUDT4Q9NZJ9 180 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 PCDHGA10Q9Y5H3 936 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 CSAG2Q9Y5P2 127 aa16.81■□□□□ 0.28
ABCF3-217ENST00000489719 SYCE1LA8MT33 242 aa16.8■□□□□ 0.28
ABCF3-217ENST00000489719 MAGEB17A8MXT2 336 aa16.8■□□□□ 0.28
ABCF3-217ENST00000489719 TCP11X1B4DZS4 312 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms