RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 METTL21AQ8WXB1 218 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 KIAA1191Q96A73 305 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 ESAMQ96AP7 390 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 KLHL31Q9H511 634 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 EPS8L2Q9H6S3 715 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 LANCL2Q9NS86 450 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 WWOXQ9NZC7 414 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 MAP10Q9P2G4 905 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 SPTAN1Q13813 2472 aaKnown RBP23.58■■□□□ 1.37
HMGN1-217ENST00000489072 C4orf51C9J302 202 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 PRAMEF4O60810 478 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 HNF4AP41235 474 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 HSPA7P48741 367 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 CDKL4Q5MAI5 379 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 PRAMEF9Q5VWM5 478 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 CPEB2Q7Z5Q1 589 aaKnown RBP23.57■■□□□ 1.36
HMGN1-217ENST00000489072 TCAIMQ8N3R3 496 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 SIRT6Q8N6T7 355 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 PDPRQ8NCN5 879 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 TRPV3Q8NET8 790 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 DNAJB14Q8TBM8 379 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 LMF1Q96S06 567 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 ASF1BQ9NVP2 202 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 PTGFRNQ9P2B2 879 aa23.57■■□□□ 1.36
HMGN1-217ENST00000489072 CHST10O43529 356 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 CDC123O75794 336 aaPredicted RBP23.56■■□□□ 1.36
HMGN1-217ENST00000489072 SEC24DO94855 1032 aaPredicted RBP23.56■■□□□ 1.36
HMGN1-217ENST00000489072 SMIM10L1P0DMW3 83 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 ITGAMP11215 1152 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 RAB8AP61006 207 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 RHAGQ02094 409 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 UBAP2LQ14157 1087 aaKnown RBP23.56■■□□□ 1.36
HMGN1-217ENST00000489072 SLBPQ14493 270 aaKnown RBP eCLIP23.56■■□□□ 1.36
HMGN1-217ENST00000489072 SULT1C3Q6IMI6 304 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 RIPOR1Q6ZS17 1223 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 RAPH1Q70E73 1250 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 ABHD13Q7L211 337 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 ANKRD37Q7Z713 158 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.56■■□□□ 1.36
HMGN1-217ENST00000489072 EXT2Q93063 718 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 MRRFQ96E11 262 aaKnown RBP23.56■■□□□ 1.36
HMGN1-217ENST00000489072 SMIM10Q96HG1 83 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 OR1F2PQ96R84 312 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 TUBB6Q9BUF5 446 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 ALG9Q9H6U8 611 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 IGSF5Q9NSI5 407 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 DNAJC11Q9NVH1 559 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 NINJ2Q9NZG7 142 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 CD274Q9NZQ7 290 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 PTBP2Q9UKA9 531 aaKnown RBP23.56■■□□□ 1.36
HMGN1-217ENST00000489072 RNF112Q9ULX5 631 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 NTNG1Q9Y2I2 539 aa23.56■■□□□ 1.36
HMGN1-217ENST00000489072 UTP20O75691 2785 aaKnown RBP23.56■■□□□ 1.36
HMGN1-217ENST00000489072 HMX2A2RU54 273 aa23.55■■□□□ 1.36
HMGN1-217ENST00000489072 TCP11X1B4DZS4 312 aa23.55■■□□□ 1.36
HMGN1-217ENST00000489072 SERPINA6P08185 405 aa23.55■■□□□ 1.36
HMGN1-217ENST00000489072 BMPR2Q13873 1038 aa23.55■■□□□ 1.36
HMGN1-217ENST00000489072 TOR1AIP1Q5JTV8 583 aa23.55■■□□□ 1.36
HMGN1-217ENST00000489072 ISCA2Q86U28 154 aa23.55■■□□□ 1.36
HMGN1-217ENST00000489072 TSLPQ969D9 159 aa23.55■■□□□ 1.36
HMGN1-217ENST00000489072 CNDP1Q96KN2 507 aa23.55■■□□□ 1.36
HMGN1-217ENST00000489072 GPRC5BQ9NZH0 403 aa23.55■■□□□ 1.36
HMGN1-217ENST00000489072 C19orf25Q9UFG5 118 aaPredicted RBP23.55■■□□□ 1.36
HMGN1-217ENST00000489072 ASB1Q9Y576 335 aa23.55■■□□□ 1.36
HMGN1-217ENST00000489072 SVILO95425 2214 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 H2AFYO75367 372 aaKnown RBP23.54■■□□□ 1.36
HMGN1-217ENST00000489072 STK16O75716 305 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 FHP07954 510 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 TFEBP19484 476 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 IL10P22301 178 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 CRABP2P29373 138 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 GLRBP48167 497 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 B3GNTL1Q67FW5 361 aaPredicted RBP23.54■■□□□ 1.36
HMGN1-217ENST00000489072 TMIGD1Q6UXZ0 262 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 PLPP5Q8NEB5 264 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 CATSPER1Q8NEC5 780 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 TBC1D20Q96BZ9 403 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 CNOT10Q9H9A5 744 aaKnown RBP23.54■■□□□ 1.36
HMGN1-217ENST00000489072 COPG2Q9UBF2 871 aa23.54■■□□□ 1.36
HMGN1-217ENST00000489072 WFS1O76024 890 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 LTA4HP09960 611 aaKnown RBP23.53■■□□□ 1.36
HMGN1-217ENST00000489072 EPORP19235 508 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 SKP1P63208 163 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 MRPL49Q13405 166 aaKnown RBP23.53■■□□□ 1.36
HMGN1-217ENST00000489072 ZNF169Q14929 603 aaPredicted RBP23.53■■□□□ 1.36
HMGN1-217ENST00000489072 ABRAXAS2Q15018 415 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 MROH9Q5TGP6 573 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 NIPAL1Q6NVV3 410 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 TBC1D1Q86TI0 1168 aaPredicted RBP23.53■■□□□ 1.36
HMGN1-217ENST00000489072 FAM26EQ8N5C1 309 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 SNX31Q8N9S9 440 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 STAG3L4Q8TBR4 150 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 NXNL1Q96CM4 212 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 ATOH8Q96SQ7 321 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 CAPS2Q9BXY5 557 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 NMRAL1Q9HBL8 299 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 PLA2G3Q9NZ20 509 aa23.53■■□□□ 1.36
HMGN1-217ENST00000489072 COPG1Q9Y678 874 aaKnown RBP23.53■■□□□ 1.36
HMGN1-217ENST00000489072 SPTBN1Q01082 2364 aaKnown RBP23.53■■□□□ 1.36
HMGN1-217ENST00000489072 URADA6NGE7 173 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms