RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 AP1S2P56377 157 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 OC90Q02509 493 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-231ENST00000488905 PWP1Q13610 501 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 DEFB134Q4QY38 66 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 KRTCAP3Q53RY4 240 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 Q6ZPB1 254 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-231ENST00000488905 KIAA0408Q6ZU52 694 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 GALNTL5Q7Z4T8 443 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 HORMAD2Q8N7B1 307 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 FAM98AQ8NCA5 519 aaKnown RBP17.3■□□□□ 0.36
HDAC6-231ENST00000488905 OR4K1Q8NGD4 311 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 OR56A3Q8NH54 315 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 SNF8Q96H20 258 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 OR4K3Q96R72 315 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 ANKRD17O75179 2603 aaKnown RBP17.3■□□□□ 0.36
HDAC6-231ENST00000488905 NPIPA5E9PKD4 350 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 AHSGP02765 367 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 SNRPB2P08579 225 aaKnown RBP17.29■□□□□ 0.36
HDAC6-231ENST00000488905 ZNF888P0CJ79 500 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-231ENST00000488905 SMSP52788 366 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 IL2P60568 153 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 OLR1P78380 273 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 RGS1Q08116 209 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 PDAP1Q13442 181 aaKnown RBP17.29■□□□□ 0.36
HDAC6-231ENST00000488905 SPANXN3Q5MJ09 141 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 NIPAL1Q6NVV3 410 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 STRA8Q7Z7C7 330 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 GALNT7Q86SF2 657 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 SPPL2CQ8IUH8 684 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 SIAH3Q8IW03 269 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 TBC1D19Q8N5T2 526 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 NT5CQ8TCD5 201 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 ELP5Q8TE02 316 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 CERS2Q96G23 380 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 PHF12Q96QT6 1004 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 SPNS1Q9H2V7 528 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 LRFN1Q9P244 771 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 SLC17A6Q9P2U8 582 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 NPIPA1Q9UND3 350 aa17.29■□□□□ 0.36
HDAC6-231ENST00000488905 GOLGA6L10A0A0M3HER8 536 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 NDC80O14777 642 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 CHST10O43529 356 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 SLC25A12O75746 678 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 B3GALT4O96024 378 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 SERPIND1P05546 499 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 SP1P08047 785 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 PPP1R7Q15435 360 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 CATSPEREQ5SY80 951 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 QSOX2Q6ZRP7 698 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 ABHD13Q7L211 337 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 KIF2BQ8N4N8 673 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 SLC5A11Q8WWX8 675 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 ATL1Q8WXF7 558 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 NEIL2Q969S2 332 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 FBXL8Q96CD0 374 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 NAT9Q9BTE0 207 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 TRIM8Q9BZR9 551 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 CDCP1Q9H5V8 836 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 ZFP69BQ9UJL9 534 aa17.28■□□□□ 0.36
HDAC6-231ENST00000488905 SAGE2PA6NJ88 616 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 CDK2AP1O14519 115 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 DNALI1O14645 258 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-231ENST00000488905 NRDCO43847 1150 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 NME2P1O60361 137 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 B4GALT2O60909 372 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 DNAJB6O75190 326 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 ENO2P09104 434 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-231ENST00000488905 ZNF24P17028 368 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 NME2P22392 152 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 TPP2P29144 1249 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-231ENST00000488905 SCTRP47872 440 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 PGGT1BP53609 377 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 REEP5Q00765 189 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 MSS51Q4VC12 460 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 HECTD2Q5U5R9 776 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 ZNF468Q5VIY5 522 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-231ENST00000488905 SLC25A25Q6KCM7 469 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-231ENST00000488905 RPS19BP1Q86WX3 136 aaKnown RBP17.27■□□□□ 0.36
HDAC6-231ENST00000488905 GHDCQ8N2G8 530 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 GPATCH11Q8N954 259 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 ACTRT1Q8TDG2 376 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 ADAMTS18Q8TE60 1221 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 LURAP1Q96LR2 239 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 TSNARE1Q96NA8 513 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 TRIM51Q9BSJ1 452 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 TRIM54Q9BYV2 358 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 ASIC3Q9UHC3 531 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 CORO1CQ9ULV4 474 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-231ENST00000488905 MEMO1Q9Y316 297 aa17.27■□□□□ 0.36
HDAC6-231ENST00000488905 C2CD3Q4AC94 2353 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 GUCA1CO95843 209 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 ABOP16442 354 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 AHRP35869 848 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 CSHL1Q14406 222 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 CDSNQ15517 529 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 MAPKAPK3Q16644 382 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 FAM45BPQ6NSW5 357 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 SBSNQ6UWP8 590 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 CYP4X1Q8N118 509 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms