RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 F11P03951 625 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 KLKB1P03952 638 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 ALPIP09923 528 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 AZGP1P25311 298 aaKnown RBP13.7□□□□□ -0.22
RER1-207ENST00000488353 PXNP49023 591 aaPredicted RBP13.7□□□□□ -0.22
RER1-207ENST00000488353 TEKQ02763 1124 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 TP53BP2Q13625 1128 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 MED22Q15528 200 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 TSTQ16762 297 aaKnown RBP13.7□□□□□ -0.22
RER1-207ENST00000488353 C5orf22Q49AR2 442 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 TJAP1Q5JTD0 557 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 SPOUT1Q5T280 376 aaKnown RBP13.7□□□□□ -0.22
RER1-207ENST00000488353 Q6ZPB1 254 aaPredicted RBP13.7□□□□□ -0.22
RER1-207ENST00000488353 VTCN1Q7Z7D3 282 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 ATCAYQ86WG3 371 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 TRIM48Q8IWZ4 208 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 ZZZ3Q8IYH5 903 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 CLHC1Q8NHS4 586 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 MTFMTQ96DP5 389 aaKnown RBP13.7□□□□□ -0.22
RER1-207ENST00000488353 BOCQ9BWV1 1114 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 ADGRE3Q9BY15 652 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 UCK2Q9BZX2 261 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 NUP50Q9UKX7 468 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 PCDHB9Q9Y5E1 797 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 PLXNA4Q9HCM2 1894 aa13.7□□□□□ -0.22
RER1-207ENST00000488353 GFRA2O00451 464 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 C1QBP02746 253 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 PTGER3P43115 390 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 RORCP51449 518 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 TAGLNQ01995 201 aaKnown RBP13.69□□□□□ -0.22
RER1-207ENST00000488353 SLC35F1Q5T1Q4 408 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 PTRHD1Q6GMV3 140 aaKnown RBP13.69□□□□□ -0.22
RER1-207ENST00000488353 SBSNQ6UWP8 590 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 SERPINA11Q86U17 422 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 CLDN19Q8N6F1 224 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 DENND6BQ8NEG7 585 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 C2orf15Q8WU43 125 aaKnown RBP13.69□□□□□ -0.22
RER1-207ENST00000488353 EID2BQ96D98 161 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 IGSF21Q96ID5 467 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 EPYCQ99645 322 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 EGFL8Q99944 293 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 TRAF4Q9BUZ4 470 aaPredicted RBP13.69□□□□□ -0.22
RER1-207ENST00000488353 ASPNQ9BXN1 380 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 GPR63Q9BZJ6 419 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 CIPCQ9C0C6 399 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 FAM83DQ9H4H8 585 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 CWH43Q9H720 699 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 RAD18Q9NS91 495 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 ELOVL2Q9NXB9 296 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 ASIC5Q9NY37 505 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 MAT2BQ9NZL9 334 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 TMPRSS11EQ9UL52 423 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 C2orf78A6NCI8 922 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 LEUTXA8MZ59 168 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 FFAR2O15552 330 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 TMCC2O75069 709 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 TRIM3O75382 744 aaPredicted RBP13.69□□□□□ -0.22
RER1-207ENST00000488353 OR2B3O76000 313 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 CCNYL3P0C7X3 344 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 HMGA1P17096 107 aaKnown RBP13.69□□□□□ -0.22
RER1-207ENST00000488353 CPN2P22792 545 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 UQCRC1P31930 480 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 S100A3P33764 101 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 KDELR2P33947 212 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 RPS19P39019 145 aaKnown RBP13.69□□□□□ -0.22
RER1-207ENST00000488353 IDH2P48735 452 aaKnown RBP13.69□□□□□ -0.22
RER1-207ENST00000488353 CLCN4P51793 760 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 TLE2Q04725 743 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 RUNX1T1Q06455 604 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 PLD1Q13393 1074 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 ATXN7L2Q5T6C5 722 aaPredicted RBP13.69□□□□□ -0.22
RER1-207ENST00000488353 DOK6Q6PKX4 331 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 SUSD1Q6UWL2 747 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 FAM151BQ6UXP7 276 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 AMIGO1Q86WK6 493 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 SDR16C5Q8N3Y7 309 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 OR6K2Q8NGY2 324 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 AUTS2Q8WXX7 1259 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 COQ8BQ96D53 544 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 PRRG3Q9BZD7 231 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 LRTM1Q9HBL6 345 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 PAK6Q9NQU5 681 aaPredicted RBP13.69□□□□□ -0.22
RER1-207ENST00000488353 DHRS7Q9Y394 339 aa13.69□□□□□ -0.22
RER1-207ENST00000488353 MEN1O00255 615 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 TAPBPO15533 448 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 GPX5O75715 221 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 CXCL10P02778 98 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 ESR1P03372 595 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 CD9P21926 228 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 PTPN6P29350 595 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 CORO1AP31146 461 aaKnown RBP13.68□□□□□ -0.22
RER1-207ENST00000488353 PSPHP78330 225 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 ARF5P84085 180 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 SUZ12Q15022 739 aaKnown RBP13.68□□□□□ -0.22
RER1-207ENST00000488353 QPRTQ15274 297 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 HECTD3Q5T447 861 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 OR4F3Q6IEY1 312 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 EIF3MQ7L2H7 374 aaKnown RBP13.68□□□□□ -0.22
RER1-207ENST00000488353 LAX1Q8IWV1 398 aa13.68□□□□□ -0.22
RER1-207ENST00000488353 LKAAEAR1Q8TD35 194 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms