RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 J3KR12 359 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 RHODO00212 210 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 PES1O00541 588 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 TRAFD1O14545 582 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 ACOT8O14734 319 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 CREB3O43889 395 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 PALMO75781 387 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 LCATP04180 440 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 CCL4P13236 92 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 PECAM1P16284 738 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 DESP17661 470 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 GM2AP17900 193 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 NFKBIAP25963 317 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 TEAD1P28347 426 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 GABRB3P28472 473 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 CD1CP29017 333 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 ALDH4A1P30038 563 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 CSTF2P33240 577 aaKnown RBP eCLIP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 UGT1A3P35503 534 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 TSPAN7P41732 249 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 PIK3CBP42338 1070 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 CCR10P46092 362 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 RGRP47804 291 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 HCAR3P49019 387 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 PAPOLAP51003 745 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 OR1D5P58170 312 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 TPI1P60174 286 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 POLR2FP61218 127 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 AP1S1P61966 158 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 RPL7AP62424 266 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 BCL2L1Q07817 233 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 IL10RBQ08334 325 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 ILF3Q12906 894 aaKnown RBP eCLIP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 DAG1Q14118 895 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 GBX1Q14549 363 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 KRTAP24-1Q3LI83 254 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 DPCR1Q3MIW9 517 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 AMZ1Q400G9 498 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 MAP9Q49MG5 647 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 HSP90AA4PQ58FG1 418 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 TCP11X2Q5H9J9 407 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 TMEM71Q6P5X7 295 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 PRSS57Q6UWY2 283 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 CLEC18BQ6UXF7 455 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 MON1BQ7L1V2 547 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 NRROSQ86YC3 692 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 CCDC112Q8NEF3 446 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 C7orf57Q8NEG2 295 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 OR4D9Q8NGE8 314 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 OR52N4Q8NGI2 321 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 CCL4L1Q8NHW4 92 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 ZNF564Q8TBZ8 553 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 ELP5Q8TE02 316 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 NR4A3Q92570 626 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 CATSPER2Q96P56 530 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 TEFMQ96QE5 360 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 PSKH2Q96QS6 385 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 NUDT22Q9BRQ3 303 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 CNPY3Q9BT09 278 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 DDA1Q9BW61 102 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 SPRY4Q9C004 299 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 SLC39A8Q9C0K1 460 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 ISCUQ9H1K1 167 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 GANQ9H2C0 597 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 RMI1Q9H9A7 625 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 RDH14Q9HBH5 336 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 PHPT1Q9NRX4 125 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 SAMSN1Q9NSI8 373 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 SLC39A1Q9NY26 324 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 TAAR2Q9P1P5 351 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 PDP2Q9P2J9 529 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 ANKMY1Q9P2S6 941 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 MOSPD1Q9UJG1 213 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 ANAPC2Q9UJX6 822 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 CORO2BQ9UQ03 480 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 MED13Q9UHV7 2174 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 HIVEP3Q5T1R4 2406 aa3.89□□□□□ -1.79
SNRNP40-205ENST00000486941 IGHV1OR21-1A0A087WYE8 117 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 CLCA1A8K7I4 914 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 A8MX80 341 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PSMD11O00231 422 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 EEF2KO00418 725 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 ZSCAN9O15535 394 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 RGS14O43566 566 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 SOCS5O75159 536 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 HEXIM1O94992 359 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PLGP00747 810 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PYGLP06737 847 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 IVLP07476 585 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 TPM2P07951 284 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 THRAP10827 490 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PEPDP12955 493 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 GP1BBP13224 206 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 LIFP15018 202 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 ERCC2P18074 760 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 AK4P27144 223 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 MAN1A1P33908 653 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 HSPA9P38646 679 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 FASLGP48023 281 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 KLK7P49862 253 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms