RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 A0A0A6YYC8 382 aaPredicted RBP18.12■□□□□ 0.49
ATG9A-221ENST00000486766 LRIT2A6NDA9 550 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 C9J4A7 227 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 I3L1I5 382 aaPredicted RBP18.12■□□□□ 0.49
ATG9A-221ENST00000486766 ERI3O43414 337 aaKnown RBP18.12■□□□□ 0.49
ATG9A-221ENST00000486766 SH3BGRLO75368 114 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 TGFB1P01137 390 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 KRT6AP02538 564 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 KRT6BP04259 564 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 CAPNS1P04632 268 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 SERPINE1P05121 402 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 IL1RNP18510 177 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 BGNP21810 368 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 HNRNPH1P31943 449 aaKnown RBP18.12■□□□□ 0.49
ATG9A-221ENST00000486766 STAT5AP42229 794 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 OR1D4P47884 311 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 KRT6CP48668 564 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 NEK2P51955 445 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 PPP2R2AP63151 447 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 SKP1P63208 163 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 HYAL2Q12891 473 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 CLN3Q13286 438 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 SGO1Q5FBB7 561 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 C10orf62Q5T681 223 aaPredicted RBP18.12■□□□□ 0.49
ATG9A-221ENST00000486766 ARHGAP40Q5TG30 622 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 ZNF385CQ66K41 422 aaPredicted RBP18.12■□□□□ 0.49
ATG9A-221ENST00000486766 PRMT9Q6P2P2 845 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 CUZD1Q86UP6 607 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 RNF175Q8N4F7 328 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 SELENOMQ8WWX9 145 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 GAL3ST3Q96A11 431 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 COL26A1Q96A83 441 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 MVB12AQ96EY5 273 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 MMABQ96EY8 250 aaPredicted RBP18.12■□□□□ 0.49
ATG9A-221ENST00000486766 KCNA7Q96RP8 456 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 MS4A8Q9BY19 250 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 REXO4Q9GZR2 422 aaKnown RBP18.12■□□□□ 0.49
ATG9A-221ENST00000486766 CHST8Q9H2A9 424 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 KLHL31Q9H511 634 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 AKIRIN1Q9H9L7 192 aaPredicted RBP18.12■□□□□ 0.49
ATG9A-221ENST00000486766 GPN3Q9UHW5 284 aaPredicted RBP18.12■□□□□ 0.49
ATG9A-221ENST00000486766 SLC22A7Q9Y694 548 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 FREM2Q5SZK8 3169 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 FRYQ5TBA9 3013 aa18.12■□□□□ 0.49
ATG9A-221ENST00000486766 CCDC88CQ9P219 2028 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 MAGEB17A8MXT2 336 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 RRP8O43159 456 aaKnown RBP18.11■□□□□ 0.49
ATG9A-221ENST00000486766 NSA2O95478 260 aaKnown RBP18.11■□□□□ 0.49
ATG9A-221ENST00000486766 CHRNGP07510 517 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 PIM1P11309 404 aaPredicted RBP18.11■□□□□ 0.49
ATG9A-221ENST00000486766 ALOX12P18054 663 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 TCN2P20062 427 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 FBLP22087 321 aaKnown RBP18.11■□□□□ 0.49
ATG9A-221ENST00000486766 DLSTP36957 453 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 RAB8AP61006 207 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 RPS13P62277 151 aaKnown RBP18.11■□□□□ 0.49
ATG9A-221ENST00000486766 TGM3Q08188 693 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 NKAIN1Q4KMZ8 207 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 ARL13AQ5H913 290 aaPredicted RBP18.11■□□□□ 0.49
ATG9A-221ENST00000486766 TCHHL1Q5QJ38 904 aaPredicted RBP18.11■□□□□ 0.49
ATG9A-221ENST00000486766 FAM219BQ5XKK7 198 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 TRIM40Q6P9F5 258 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 CHSY3Q70JA7 882 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 PRSS41Q7RTY9 318 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 OR9A4Q8NGU2 314 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 UTP15Q8TED0 518 aaKnown RBP18.11■□□□□ 0.49
ATG9A-221ENST00000486766 CT55Q8WUE5 264 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.11■□□□□ 0.49
ATG9A-221ENST00000486766 KIAA1143Q96AT1 154 aaPredicted RBP18.11■□□□□ 0.49
ATG9A-221ENST00000486766 MS4A6EQ96DS6 147 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 FAR2Q96K12 515 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 F2RL3Q96RI0 385 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 CENPKQ9BS16 269 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 DPH1Q9BZG8 443 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 ZNF304Q9HCX3 659 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 IFT80Q9P2H3 777 aaPredicted RBP18.11■□□□□ 0.49
ATG9A-221ENST00000486766 CROTQ9UKG9 612 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 RAXQ9Y2V3 346 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 NAALAD2Q9Y3Q0 740 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 TIMM22Q9Y584 194 aa18.11■□□□□ 0.49
ATG9A-221ENST00000486766 LOC101059948A0A1B0GTJ6 334 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 TMEM114B3SHH9 223 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 FOXE1O00358 373 aaPredicted RBP18.1■□□□□ 0.49
ATG9A-221ENST00000486766 MANBAO00462 879 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 KLK10O43240 276 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 FOXS1O43638 330 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 KLHL18O94889 574 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 HSPA4LO95757 839 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 TBX6O95947 436 aaPredicted RBP18.1■□□□□ 0.49
ATG9A-221ENST00000486766 PDYNP01213 254 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 ITGAXP20702 1163 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 GRK2P25098 689 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 EIF2S3P41091 472 aaKnown RBP18.1■□□□□ 0.49
ATG9A-221ENST00000486766 RAP1GDS1P52306 607 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 FOXA1P55317 472 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 SNRPNP63162 240 aaKnown RBP18.1■□□□□ 0.49
ATG9A-221ENST00000486766 GALNT1Q10472 559 aaPredicted RBP18.1■□□□□ 0.49
ATG9A-221ENST00000486766 DEFB134Q4QY38 66 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 MLIPQ5VWP3 458 aa18.1■□□□□ 0.49
ATG9A-221ENST00000486766 KHDRBS2Q5VWX1 349 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms