RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 RYDENQ9NUL5 291 aaKnown RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 STMN3Q9NZ72 180 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 WWOXQ9NZC7 414 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 COPG2Q9UBF2 871 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 SLC22A14Q9Y267 594 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 MMACHCQ9Y4U1 282 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 RELNP78509 3460 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 LRRK2Q5S007 2527 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 NPEPPSL1A6NEC2 478 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 SYCE1LA8MT33 242 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 TP73O15350 636 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 PRMT3O60678 531 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 PRAMEF2O60811 474 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 C1GALT1C1LP0DN25 315 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 CD46P15529 392 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 SLC6A12P48065 614 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 CASP6P55212 293 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 RHAGQ02094 409 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 MRPL49Q13405 166 aaKnown RBP10.79□□□□□ -0.68
CCM2-213ENST00000480658 SYT16Q17RD7 645 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 DEFB134Q4QY38 66 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 C4orf17Q53FE4 359 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 TRIM40Q6P9F5 258 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 LRRC70Q7Z2Q7 622 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 ZNF572Q7Z3I7 529 aaPredicted RBP10.79□□□□□ -0.68
CCM2-213ENST00000480658 GPSM1Q86YR5 675 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 DTWD1Q8N5C7 304 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 SIRT6Q8N6T7 355 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 PDPRQ8NCN5 879 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 OR1N1Q8NGS0 311 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 STAG3L4Q8TBR4 150 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 PSMF1Q92530 271 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 RHBDF1Q96CC6 855 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 PTCD3Q96EY7 689 aaKnown RBP10.79□□□□□ -0.68
CCM2-213ENST00000480658 TSNARE1Q96NA8 513 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 UTP23Q9BRU9 249 aaKnown RBP10.79□□□□□ -0.68
CCM2-213ENST00000480658 KCNK13Q9HB14 408 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 ZBTB20Q9HC78 741 aaPredicted RBP10.79□□□□□ -0.68
CCM2-213ENST00000480658 PRDM9Q9NQV7 894 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 DNAJC11Q9NVH1 559 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 PLEKHB1Q9UF11 243 aaPredicted RBP10.79□□□□□ -0.68
CCM2-213ENST00000480658 ADGRE2Q9UHX3 823 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 PSAT1Q9Y617 370 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 SPACA6W5XKT8 324 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 SEC16AO15027 2179 aa10.79□□□□□ -0.68
CCM2-213ENST00000480658 WIPF3A6NGB9 483 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 ANKDD1BA6NHY2 528 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 FAM159BA6NKW6 160 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 CDC7O00311 574 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 FCHO1O14526 889 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 RAD51CO43502 376 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 LCMT2O60294 686 aaKnown RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 ABCB7O75027 752 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 CLEC3AO75596 197 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 STK16O75716 305 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 SEC24DO94855 1032 aaPredicted RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 ZNF888P0CJ79 500 aaPredicted RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 CCDC166P0CW27 439 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 HSD17B7P56937 341 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 OR4D2P58180 307 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 FASTKD3Q14CZ7 662 aaKnown RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 RBBP5Q15291 538 aaKnown RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 TSNQ15631 228 aaKnown RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 ZKSCAN8Q15776 578 aaPredicted RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 PDK4Q16654 411 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 EIF2S3LQ2VIR3 472 aaKnown RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 SFT2D3Q587I9 215 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 ACER2Q5QJU3 275 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 CATSPEREQ5SY80 951 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 H3F3CQ6NXT2 135 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 C8orf74Q6P047 294 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 METTL2BQ6P1Q9 378 aaKnown RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 PAPD4Q6PIY7 484 aaKnown RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 RAPH1Q70E73 1250 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 TAOK1Q7L7X3 1001 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 MAMDC2Q7Z304 686 aaPredicted RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 PDSS2Q86YH6 399 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 CTAGE3PQ8IX95 158 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 EID3Q8N140 333 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 NR4A3Q92570 626 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 KIAA1191Q96A73 305 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 C19orf60Q96EN9 201 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 PEX11GQ96HA9 241 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 CENPKQ9BS16 269 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 DPH5Q9H2P9 285 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 SYNPO2LQ9H987 977 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 COPS7BQ9H9Q2 264 aaPredicted RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 NMRAL1Q9HBL8 299 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 NUDT4Q9NZJ9 180 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 SLC17A6Q9P2U8 582 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 MTRF1LQ9UGC7 380 aaKnown RBP10.78□□□□□ -0.68
CCM2-213ENST00000480658 RNF112Q9ULX5 631 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 PYCARDQ9ULZ3 195 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 SH2B3Q9UQQ2 575 aa10.78□□□□□ -0.68
CCM2-213ENST00000480658 HECTD1Q9ULT8 2610 aa10.77□□□□□ -0.68
CCM2-213ENST00000480658 A0A087X1B8 175 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 A8MUI8 341 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 FFAR3O14843 346 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 GPR42O15529 346 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 CHST10O43529 356 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms