RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 AHRP35869 848 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 GDF5P43026 501 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 SCTRP47872 440 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 MAT1AQ00266 395 aaKnown RBP15.31■□□□□ 0.04
COL1A1-205ENST00000476387 CDC16Q13042 620 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 BMPR2Q13873 1038 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 ELOAQ14241 798 aaKnown RBP15.31■□□□□ 0.04
COL1A1-205ENST00000476387 HERC3Q15034 1050 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 RBBP5Q15291 538 aaKnown RBP15.31■□□□□ 0.04
COL1A1-205ENST00000476387 SYT16Q17RD7 645 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 C18orf21Q32NC0 220 aaPredicted RBP15.31■□□□□ 0.04
COL1A1-205ENST00000476387 MFSD4BQ5TF39 518 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 MROH9Q5TGP6 573 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 TAOK1Q7L7X3 1001 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 PRSS41Q7RTY9 318 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 ZC3H7AQ8IWR0 971 aaKnown RBP15.31■□□□□ 0.04
COL1A1-205ENST00000476387 KLHDC8AQ8IYD2 350 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 SNX31Q8N9S9 440 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 PDPRQ8NCN5 879 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 ST6GALNAC3Q8NDV1 305 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 ZNF740Q8NDX6 193 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 STAG3L4Q8TBR4 150 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 C8orf44Q96CB5 159 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 CAPS2Q9BXY5 557 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 SPNS1Q9H2V7 528 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 ALG9Q9H6U8 611 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 DNAJC11Q9NVH1 559 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 ZFP69BQ9UJL9 534 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 SLC5A6Q9Y289 635 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 ACOT9Q9Y305 439 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 SLC22A7Q9Y694 548 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
COL1A1-205ENST00000476387 A0A087X1B8 175 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 LOC102723996A0A087X1L8 192 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 URADA6NGE7 173 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 SUPT3HB4E1H0 165 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 SGK494L7N484 410 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 CLGNO14967 610 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 H2AFYO75367 372 aaKnown RBP15.3■□□□□ 0.04
COL1A1-205ENST00000476387 RDH16O75452 317 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 SUPT3HO75486 399 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 KLHL18O94889 574 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 LDLRP01130 860 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 SERPINA7P05543 415 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 INHBAP08476 426 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 CYC1P08574 325 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 PRR35P0CG20 571 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 RNF224P0DH78 156 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 SOX11P35716 441 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 HSPA7P48741 367 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 SERPINB8P50452 374 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 AP2B1P63010 937 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 FAAH2Q6GMR7 532 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 NIPAL1Q6NVV3 410 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 RPUSD3Q6P087 351 aaKnown RBP15.3■□□□□ 0.04
COL1A1-205ENST00000476387 RIPOR1Q6ZS17 1223 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 ABHD13Q7L211 337 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 TRPV3Q8NET8 790 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 NT5CQ8TCD5 201 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 CNDP1Q96KN2 507 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 TMEM79Q9BSE2 394 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 RIC8BQ9NVN3 520 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 GPRC5BQ9NZH0 403 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 NUDT4Q9NZJ9 180 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 HCN3Q9P1Z3 774 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 ERRFI1Q9UJM3 462 aaPredicted RBP15.3■□□□□ 0.04
COL1A1-205ENST00000476387 MKL2Q9ULH7 1088 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 NAALAD2Q9Y3Q0 740 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 CENPEQ02224 2701 aa15.3■□□□□ 0.04
COL1A1-205ENST00000476387 IGHV1-45A0A0A0MS14 117 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 KERAO60938 352 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 STK16O75716 305 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 BMP10O95393 424 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 C1GALT1C1LP0DN25 315 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 ALOX12P18054 663 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 ECHS1P30084 290 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 GGT5P36269 586 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 GMPRP36959 345 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 XCR1P46094 333 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 SNRPNP63162 240 aaKnown RBP15.29■□□□□ 0.04
COL1A1-205ENST00000476387 EEF1A2Q05639 463 aaKnown RBP15.29■□□□□ 0.04
COL1A1-205ENST00000476387 SLBPQ14493 270 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL1A1-205ENST00000476387 FAM83EQ2M2I3 478 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 MINDY4Q4G0A6 757 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 KLC3Q6P597 504 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 TMEM205Q6UW68 189 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 LINC00696Q6ZRV3 163 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 IFT20Q8IY31 132 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 KRT78Q8N1N4 520 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 TTLQ8NG68 377 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 OR51Q1Q8NH59 317 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 GRHL3Q8TE85 626 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 METTL21AQ8WXB1 218 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 MOCOSQ96EN8 888 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 C5orf34Q96MH7 638 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 SNX15Q9NRS6 342 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 SVILO95425 2214 aa15.29■□□□□ 0.04
COL1A1-205ENST00000476387 DYTNA2CJ06 578 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 ZNF860A6NHJ4 632 aa15.28■□□□□ 0.04
COL1A1-205ENST00000476387 SYCE1LA8MT33 242 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms