RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 AAGABQ6PD74 315 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 VN1R4Q7Z5H5 301 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 KCT2Q8NC54 265 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 RBM15BQ8NDT2 890 aaKnown RBP17.27■□□□□ 0.36
ATG4B-217ENST00000475693 REPS1Q96D71 796 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 CMTM7Q96FZ5 175 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 AHCYL2Q96HN2 611 aaKnown RBP17.27■□□□□ 0.36
ATG4B-217ENST00000475693 MAGEB10Q96LZ2 347 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-217ENST00000475693 RHBGQ9H310 441 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 PFDN4Q9NQP4 134 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 PCDHGA4Q9Y5G9 962 aa17.27■□□□□ 0.36
ATG4B-217ENST00000475693 IGHV5-51A0A0C4DH38 117 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 A0A0J9YY10 115 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 TRBC2A0A5B9 178 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 LILRA5A6NI73 299 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 P2RX6O15547 441 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 KLHL18O94889 574 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 CER1O95813 267 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 COX4I1P13073 169 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 CXCR2P25025 360 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 GRK3P35626 688 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 ZFP36L2P47974 494 aaKnown RBP17.27■□□□□ 0.35
ATG4B-217ENST00000475693 SQLEQ14534 574 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 SPATA19Q7Z5L4 167 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 PROKR1Q8TCW9 393 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 VPS33AQ96AX1 596 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 NUDT22Q9BRQ3 303 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 MS4A8Q9BY19 250 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.27■□□□□ 0.35
ATG4B-217ENST00000475693 SDR39U1Q9NRG7 319 aaPredicted RBP17.27■□□□□ 0.35
ATG4B-217ENST00000475693 ENTPD2Q9Y5L3 495 aa17.27■□□□□ 0.35
ATG4B-217ENST00000475693 ZFHX2Q9C0A1 2572 aaPredicted RBP17.27■□□□□ 0.35
ATG4B-217ENST00000475693 FAM221BA6H8Z2 402 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 FOXE1O00358 373 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-217ENST00000475693 PLPP1O14494 284 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 AKAP10O43572 662 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 EEDO75530 441 aaKnown RBP17.26■□□□□ 0.35
ATG4B-217ENST00000475693 CCNDBP1O95273 360 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 KLK1P06870 262 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 SDC1P18827 310 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 CD1CP29017 333 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 SEPHS1P49903 392 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 ACSM2AQ08AH3 577 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 KCNAB1Q14722 419 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 HKDC1Q2TB90 917 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 VPS26BQ4G0F5 336 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 ACSM2BQ68CK6 577 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 RNF165Q6ZSG1 346 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 COMMD6Q7Z4G1 85 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 UBE3DQ7Z6J8 389 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 MMP21Q8N119 569 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 MIER2Q8N344 545 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 DTWD1Q8N5C7 304 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 BAHD1Q8TBE0 780 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-217ENST00000475693 CHTF18Q8WVB6 975 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 STON2Q8WXE9 905 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 NPAS2Q99743 824 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 BRF2Q9HAW0 419 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 OTOGLQ3ZCN5 2332 aa17.26■□□□□ 0.35
ATG4B-217ENST00000475693 NR5A2O00482 541 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 ANKRD28O15084 1053 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 TNFSF14O43557 240 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 IDO1P14902 403 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 ANPEPP15144 967 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 PIK3CBP42338 1070 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 RAB8AP61006 207 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 PLIN5Q00G26 463 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 AP1ARQ63HQ0 302 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 ANKRD26P1Q6NSI1 321 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 ULK2Q8IYT8 1036 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 SLC13A3Q8WWT9 602 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 UBE2E3Q969T4 207 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 C11orf24Q96F05 449 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-217ENST00000475693 OR2A5Q96R48 311 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 SYNDIG1Q9H7V2 258 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 UCK1Q9HA47 277 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 LHX9Q9NQ69 397 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 PILRAQ9UKJ1 303 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 SERTM1A2A2V5 107 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 EME2A4GXA9 379 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-217ENST00000475693 DGKQP52824 942 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 STX1BP61266 288 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 SLC5A12Q1EHB4 618 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 DEPDC1Q5TB30 811 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 KHDRBS2Q5VWX1 349 aaKnown RBP17.25■□□□□ 0.35
ATG4B-217ENST00000475693 FAM180BQ6P0A1 224 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 RABEPKQ7Z6M1 372 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 CHCHD4Q8N4Q1 142 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 C17orf62Q9BQA9 187 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 DUSP23Q9BVJ7 150 aa17.25■□□□□ 0.35
ATG4B-217ENST00000475693 ZNF717Q9BY31 904 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-217ENST00000475693 EIF3LQ9Y262 564 aaKnown RBP17.25■□□□□ 0.35
ATG4B-217ENST00000475693 ANKRD33BA6NCL7 494 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 LRIT2A6NDA9 550 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 EIF4E1BA6NMX2 242 aaKnown RBP17.24■□□□□ 0.35
ATG4B-217ENST00000475693 AIM2O14862 343 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 ALPPL2P10696 532 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 PTX3P26022 381 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-217ENST00000475693 NR0B2Q15466 257 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms