RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 OR8K5Q8NH50 307 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 TRPC4APQ8TEL6 797 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 NANOS1Q8WY41 292 aaKnown RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 PTCD3Q96EY7 689 aaKnown RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 ATP6V1G3Q96LB4 118 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 GBP5Q96PP8 586 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 ZNF382Q96SR6 550 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 RUFY1Q96T51 708 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 AIF1LQ9BQI0 150 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 NTMT1Q9BV86 223 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 ASPSCR1Q9BZE9 553 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 RHBGQ9H310 441 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 KLHL31Q9H511 634 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 NT5DC2Q9H857 520 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 AKAP7Q9P0M2 348 aaPredicted RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 DHCR7Q9UBM7 475 aaKnown RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 PCDHB3Q9Y5E6 796 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 AP1M2Q9Y6Q5 423 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 NF1P21359 2839 aa6.65□□□□□ -1.35
LIMD1-204ENST00000474665 F8P00451 2351 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 HYKKA2RU49 373 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 LRIT2A6NDA9 550 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 H0YIV9 168 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 H3BQF6 201 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 FFAR3O14843 346 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 CLGNO14967 610 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 TM9SF1O15321 606 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 GPR42O15529 346 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 UGDHO60701 494 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 TRIM13O60858 407 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 KATNA1O75449 491 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 SCRG1O75711 98 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 SUPT7LO94864 414 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 OR4F21O95013 312 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 ETHE1O95571 254 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 ONECUT2O95948 504 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 EIF2S1P05198 315 aaKnown RBP6.64□□□□□ -1.35
LIMD1-204ENST00000474665 CHRNGP07510 517 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 RNF224P0DH78 156 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 SMIM10L1P0DMW3 83 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 SFTPCP11686 197 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 WT1P19544 449 aaPredicted RBP6.64□□□□□ -1.35
LIMD1-204ENST00000474665 F8A1P23610 371 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 HNRNPH1P31943 449 aaKnown RBP6.64□□□□□ -1.35
LIMD1-204ENST00000474665 AHRP35869 848 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 NEK2P51955 445 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 FOXL2P58012 376 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 CYP4F2P78329 520 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 LCP2Q13094 533 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 CLN3Q13286 438 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 NAA25Q14CX7 972 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 ZRSR2Q15696 482 aaKnown RBP6.64□□□□□ -1.35
LIMD1-204ENST00000474665 CPSF6Q16630 551 aaKnown RBP eCLIP6.64□□□□□ -1.35
LIMD1-204ENST00000474665 ADPRMQ3LIE5 342 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 GGTA1PQ4G0N0 100 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 TCTE1Q5JU00 501 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 C1orf189Q5VU69 101 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 FAM69BQ5VUD6 431 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 LIPMQ5VYY2 423 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 LIPJQ5W064 366 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 GRHL2Q6ISB3 625 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 RHBDD2Q6NTF9 364 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 TLDC1Q6P9B6 456 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 FAM199XQ6PEV8 388 aaPredicted RBP6.64□□□□□ -1.35
LIMD1-204ENST00000474665 FAM198BQ6UWH4 519 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 COX15Q7KZN9 410 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 UBE3DQ7Z6J8 389 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 ASPGQ86U10 573 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 TMEM126BQ8IUX1 230 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 DSELQ8IZU8 1212 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 AFAP1L2Q8N4X5 818 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 AMER3Q8N944 861 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 OR4F6Q8NGB9 312 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 HUS1BQ8NHY5 278 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 WDR20Q8TBZ3 569 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 NT5CQ8TCD5 201 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 AGAP11Q8TF27 550 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 ZNF473Q8WTR7 871 aaKnown RBP6.64□□□□□ -1.35
LIMD1-204ENST00000474665 SLC13A3Q8WWT9 602 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 NKD1Q969G9 470 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 THAP11Q96EK4 314 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 SMIM10Q96HG1 83 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 TEFMQ96QE5 360 aaKnown RBP6.64□□□□□ -1.35
LIMD1-204ENST00000474665 KCNA7Q96RP8 456 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 ZPBPQ9BS86 351 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 EFCAB11Q9BUY7 163 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 CAPS2Q9BXY5 557 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 ULBP3Q9BZM4 244 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 SLC6A16Q9GZN6 736 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 C20orf27Q9GZN8 174 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 SLC25A18Q9H1K4 315 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 ACTR8Q9H981 624 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 ACTR5Q9H9F9 607 aaPredicted RBP6.64□□□□□ -1.35
LIMD1-204ENST00000474665 KCNK9Q9NPC2 374 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 LHX9Q9NQ69 397 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 THSD1Q9NS62 852 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 FARSBQ9NSD9 589 aaKnown RBP6.64□□□□□ -1.35
LIMD1-204ENST00000474665 CUTCQ9NTM9 273 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 ZFP69BQ9UJL9 534 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms