RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 NFAM1Q8NET5 270 aaPredicted RBP8.73□□□□□ -1.01
VCL-204ENST00000472585 PPHLN1Q8NEY8 458 aaKnown RBP8.73□□□□□ -1.01
VCL-204ENST00000472585 GSDMBQ8TAX9 411 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 FAM57AQ8TBR7 257 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 MAGEC3Q8TD91 643 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 ASB11Q8WXH4 323 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 RERGQ96A58 199 aaPredicted RBP8.73□□□□□ -1.01
VCL-204ENST00000472585 PEX11GQ96HA9 241 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 HES6Q96HZ4 224 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 FOPNLQ96NB1 174 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 OLFM1Q99784 485 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 KIFC1Q9BW19 673 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 CLEC4MQ9H2X3 399 aaPredicted RBP8.73□□□□□ -1.01
VCL-204ENST00000472585 SYBUQ9NX95 663 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 AMFRQ9UKV5 643 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 HRNRQ86YZ3 2850 aaPredicted RBP8.72□□□□□ -1.01
VCL-204ENST00000472585 VPS13CQ709C8 3753 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 TLN2Q9Y4G6 2542 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 SCN3AQ9NY46 2000 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 E7EVH7 732 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 TXNDC9O14530 226 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 NDC80O14777 642 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 HS6ST1O60243 411 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 AVILO75366 819 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 ZNF189O75820 626 aaPredicted RBP8.72□□□□□ -1.01
VCL-204ENST00000472585 GAS8O95995 478 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 HEXAP06865 529 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 CYC1P08574 325 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 CYLC1P35663 651 aaPredicted RBP8.72□□□□□ -1.01
VCL-204ENST00000472585 CETN2P41208 172 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 SKIV2L2P42285 1042 aaKnown RBP8.72□□□□□ -1.01
VCL-204ENST00000472585 ADARP55265 1226 aaKnown RBP8.72□□□□□ -1.01
VCL-204ENST00000472585 DLX5P56178 289 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 MLF1P58340 268 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 OLR1P78380 273 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 BTG2P78543 158 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 ABATP80404 500 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 PRR20EP86478 221 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 PRR20CP86479 221 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 PRR20DP86480 221 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 PRR20BP86481 221 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 PRR20AP86496 221 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 TIAL1Q01085 375 aaKnown RBP eCLIP8.72□□□□□ -1.01
VCL-204ENST00000472585 CUL1Q13616 776 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 NAA25Q14CX7 972 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 ABRAXAS2Q15018 415 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 EXT1Q16394 746 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 NDUFA9Q16795 377 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 PEX26Q7Z412 305 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 MDGA2Q7Z553 956 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 MPP5Q8N3R9 675 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 PRELID2Q8N945 189 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 FBXO15Q8NCQ5 510 aaPredicted RBP8.72□□□□□ -1.01
VCL-204ENST00000472585 OR52N2Q8NGI0 321 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 ZCCHC10Q8TBK6 192 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 MRFAP1L1Q96HT8 127 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 GPATCH1Q9BRR8 931 aaKnown RBP8.72□□□□□ -1.01
VCL-204ENST00000472585 DEPPQ9NTK1 212 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 TMEM184CQ9NVA4 438 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 ZNF358Q9NW07 568 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 C19orf25Q9UFG5 118 aaPredicted RBP8.72□□□□□ -1.01
VCL-204ENST00000472585 ADAMTS6Q9UKP5 1117 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 ZNF148Q9UQR1 794 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 NAALAD2Q9Y3Q0 740 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 MRFAP1Q9Y605 127 aa8.72□□□□□ -1.01
VCL-204ENST00000472585 PINLYPA6NC86 204 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 MAGEB17A8MXT2 336 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 TFECO14948 347 aaPredicted RBP8.71□□□□□ -1.02
VCL-204ENST00000472585 KLK8O60259 260 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 CDC40O60508 579 aaKnown RBP eCLIP8.71□□□□□ -1.02
VCL-204ENST00000472585 PDE9AO76083 593 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 SYF2O95926 243 aaKnown RBP8.71□□□□□ -1.02
VCL-204ENST00000472585 ESR1P03372 595 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 TFEBP19484 476 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 TRHRP34981 398 aaPredicted RBP8.71□□□□□ -1.02
VCL-204ENST00000472585 AGTR2P50052 363 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 ITGA8P53708 1063 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 OR4D2P58180 307 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 ACTN3Q08043 901 aaPredicted RBP8.71□□□□□ -1.02
VCL-204ENST00000472585 SNTB1Q13884 538 aaKnown RBP8.71□□□□□ -1.02
VCL-204ENST00000472585 RPS6KA1Q15418 735 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 MBOAT1Q6ZNC8 495 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 ACAD11Q709F0 780 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 DENND6AQ8IWF6 608 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 ZZZ3Q8IYH5 903 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 LGI4Q8N135 537 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 ARMC10Q8N2F6 343 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 AFAP1L2Q8N4X5 818 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 SLC5A8Q8N695 610 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 ZNF740Q8NDX6 193 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 WFDC11Q8NEX6 87 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 OR10Q1Q8NGQ4 319 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 C16orf52Q8NHV5 167 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 MBD6Q96DN6 1003 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 ARSGQ96EG1 525 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 PWWP2AQ96N64 755 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 LPAR4Q99677 370 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 IL22Q9GZX6 179 aa8.71□□□□□ -1.02
VCL-204ENST00000472585 TP63Q9H3D4 680 aaPredicted RBP8.71□□□□□ -1.02
VCL-204ENST00000472585 ZNF223Q9UK11 482 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms