RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RPL21P46778 160 aaKnown RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 SCTRP47872 440 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 IL2P60568 153 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 RPS15AP62244 130 aaKnown RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 RUNX2Q13950 521 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 ELOAQ14241 798 aaKnown RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 ABRAXAS2Q15018 415 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 NSDHLQ15738 373 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 SPANXN3Q5MJ09 141 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 UBAP2Q5T6F2 1119 aaKnown RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 IRAK1BP1Q5VVH5 260 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 DUPD1Q68J44 220 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 RPUSD3Q6P087 351 aaKnown RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 VN1R5Q7Z5H4 357 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 THOC6Q86W42 341 aaKnown RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 MYO1HQ8N1T3 1032 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 BCORP1Q8N888 145 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 ZNF454Q8N9F8 522 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 MDS2Q8NDY4 140 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 FBXO36Q8NEA4 188 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 PLPP5Q8NEB5 264 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 NFAM1Q8NET5 270 aaPredicted RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 CALML6Q8TD86 181 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 UTP15Q8TED0 518 aaKnown RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 CREB3L4Q8TEY5 395 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 NR4A3Q92570 626 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 FBXL8Q96CD0 374 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 SMIM10Q96HG1 83 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 KCNK17Q96T54 332 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 TUBB6Q9BUF5 446 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 CDCP1Q9H5V8 836 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 LIN28AQ9H9Z2 209 aaKnown RBP7.59□□□□□ -1.19
USP48-207ENST00000471752 GRPEL1Q9HAV7 217 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 C14orf105Q9NVL8 296 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 RIC8BQ9NVN3 520 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 SLC22A14Q9Y267 594 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 HRH3Q9Y5N1 445 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 COMMD10Q9Y6G5 202 aa7.59□□□□□ -1.19
USP48-207ENST00000471752 NUP210LQ5VU65 1888 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 TRGV8A0A0C4DH27 118 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 DYTNA2CJ06 578 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 OR5H15A6NDH6 313 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 NCF1BA6NI72 391 aaPredicted RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 ZNF839A8K0R7 811 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 NCF1CA8MVU1 366 aaPredicted RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 SLC16A5O15375 505 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 PRAMEF2O60811 474 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 SH3BGRLO75368 114 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 NEURL1O76050 574 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 SEC31AO94979 1220 aaKnown RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 WISP3O95389 354 aaPredicted RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 FHP07954 510 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 NCF1P14598 390 aaPredicted RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 ALOX12P18054 663 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 HNRNPH1P31943 449 aaKnown RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 CCR8P51685 355 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 OR4D2P58180 307 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 SLC26A5P58743 744 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 GNG11P61952 73 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 ADORA2A-AS1P86434 159 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 DR1Q01658 176 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 PDIA2Q13087 525 aaKnown RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 USP10Q14694 798 aaKnown RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 OR1C1Q15619 314 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 TSNQ15631 228 aaKnown RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 C3AR1Q16581 482 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 NDUFA9Q16795 377 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 ZNF766Q5HY98 468 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 ABHD17BQ5VST6 288 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 ARMC3Q5W041 872 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 PLAG1Q6DJT9 500 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 PAPD4Q6PIY7 484 aaKnown RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 NXPE4Q6UWF7 544 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 FAM180AQ6UWF9 173 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 GFRALQ6UXV0 394 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 C3P1Q6ZMU1 363 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 STRA8Q7Z7C7 330 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 ZC3HC1Q86WB0 502 aaKnown RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 SIAH3Q8IW03 269 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 LMNTD2Q8IXW0 634 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 CYP4X1Q8N118 509 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 RNF175Q8N4F7 328 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 ZNF321PQ8N8H1 164 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 CAMKVQ8NCB2 501 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 ADAMTS18Q8TE60 1221 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 DOK4Q8TEW6 326 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 GRK7Q8WTQ7 553 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 THAP3Q8WTV1 239 aaPredicted RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 ITLN2Q8WWU7 325 aaPredicted RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 SLC5A11Q8WWX8 675 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 METTL21AQ8WXB1 218 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 SLCO2A1Q92959 643 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 RELTQ969Z4 430 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 CCDC120Q96HB5 630 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 PTCHD1Q96NR3 888 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 KRT12Q99456 494 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 SARGQ9BW04 601 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 KCNK13Q9HB14 408 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 ANKHQ9HCJ1 492 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms