RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 C1QL3Q5VWW1 255 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 PMS2CLQ68D20 193 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ANKS6Q68DC2 871 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 DUS1LQ6P1R4 473 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 TTC23LQ6PF05 361 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 KYAT3Q6YP21 454 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 MBOAT1Q6ZNC8 495 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ZCCHC23Q6ZST2 131 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 SEM1Q6ZVN7 128 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 RPS27LQ71UM5 84 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 MTERF4Q7Z6M4 381 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ABI3BPQ7Z7G0 1075 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 C11orf96Q7Z7L8 435 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ISCA2Q86U28 154 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 C10orf107Q8IVU9 208 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 FBXO39Q8N4B4 442 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 CCNYL1Q8N7R7 359 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 PTGR2Q8N8N7 351 aaPredicted RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 LMNTD1Q8N9Z9 388 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ZFP28Q8NHY6 868 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 HM13Q8TCT9 377 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 MCOLN3Q8TDD5 553 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 LRRC8CQ8TDW0 803 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 DENND1AQ8TEH3 1009 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 PPP4R1Q8TF05 950 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 DNASE2BQ8WZ79 361 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF75CPQ92670 426 aaPredicted RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 TFGQ92734 400 aaPredicted RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 TFAP2CQ92754 450 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 KIAA1191Q96A73 305 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ESAMQ96AP7 390 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 PTERQ96BW5 349 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 C1GALT1C1Q96EU7 318 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 UBXN10Q96LJ8 280 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 LRGUKQ96M69 825 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 C12orf66Q96MD2 445 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 GPR78Q96P69 363 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 TAAR9Q96RI9 348 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 MRPL57Q9BQC6 102 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 GTPBP2Q9BX10 602 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 C1QTNF3Q9BXJ4 246 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 CAPS2Q9BXY5 557 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 TRIM54Q9BYV2 358 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 SHCBP1LQ9BZQ2 653 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 DERL2Q9GZP9 239 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 FAM107BQ9H098 131 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 C11orf54Q9H0W9 315 aaPredicted RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ATG10Q9H0Y0 220 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 PCED1AQ9H1Q7 454 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ARRDC1-AS1Q9H2J1 176 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 MRPL46Q9H2W6 279 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 DPEP2Q9H4A9 486 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 TFB2MQ9H5Q4 396 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 RMI1Q9H9A7 625 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 COG4Q9H9E3 785 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 IMP3Q9NV31 184 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ARL15Q9NXU5 204 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 NCKIPSDQ9NZQ3 722 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 APOBEC3BQ9UH17 382 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC23A1Q9UHI7 598 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 RAB23Q9ULC3 237 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ACSL5Q9ULC5 683 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 PLAGL1Q9UM63 463 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 RUVBL1Q9Y265 456 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ASF1AQ9Y294 204 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 WDR37Q9Y2I8 494 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ANGPTL3Q9Y5C1 460 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 TECTAO75443 2155 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 EYSQ5T1H1 3165 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ABCA7Q8IZY2 2146 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PLXNB3Q9ULL4 1909 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 C17orf113A0A1B0GUU1 675 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 OR52A4PA6NMU1 304 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SYCE1LA8MT33 242 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 B4DGG1 531 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 TCP11X1B4DZS4 312 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 GPR89AB7ZAQ6 455 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 G3V2L1 256 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 H3BML4 177 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 TOR1BO14657 336 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 VILLO15195 856 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC16A5O15375 505 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 FFAR2O15552 330 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CCNT2O60583 730 aaKnown RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 KCNJ13O60928 360 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 KERAO60938 352 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 LYPLA1O75608 230 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SUPT7LO94864 414 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SLCO2B1O94956 709 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SIX3O95343 332 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 WISP3O95389 354 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 C1orf105O95561 183 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 EML2O95834 649 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 TSPAN12O95859 305 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 VIPP01282 170 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CATP04040 527 aaKnown RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CSF2P04141 144 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 C8GP07360 202 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms